Intestinibacter bartlettii: NQ514_03210
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Entry
NQ514_03210 CDS
T08452
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ibr
Intestinibacter bartlettii
Pathway
ibr03030
DNA replication
ibr03430
Mismatch repair
ibr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ibr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NQ514_03210
03430 Mismatch repair
NQ514_03210
03440 Homologous recombination
NQ514_03210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ibr03032
]
NQ514_03210
03400 DNA repair and recombination proteins [BR:
ibr03400
]
NQ514_03210
Enzymes [BR:
ibr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NQ514_03210
DNA replication proteins [BR:
ibr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NQ514_03210
DNA repair and recombination proteins [BR:
ibr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NQ514_03210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
tRNA_anti_2
DUF1836
Motif
Other DBs
NCBI-ProteinID:
UWO81502
LinkDB
All DBs
Position
615576..619112
Genome browser
AA seq
1178 aa
AA seq
DB search
MSSEFAHLHVHTEYSLLDGFSRVKKLIKRTKELGMKSVAITDHGNMFGVIDFYKEAKKQG
IKPVIGCELYTAQRSLTDKDPNFDKRYGHLILLAENMTGYQNLIKLVSISYVDGFYYKPR
VDIEALREHSEGIICLSACLAGDVSNALMNRNYEKAKEIALTYNEIFGQGNFYLELQDHN
LPEQKEVNASLVKLSKELNIPLVATNDIHYVDKADSKAHDVLLCIQMGKTLNDPARMRFG
TEEFYLKSREEMEELFPYALEALDNTAKIAERCNVEFDFNTIHLPNYEVPEGYTTSGYLE
ELCYKGLYERYENPSQEILDRLKYELGVINKMGYVEYFLITWDFINFAKENGIMVGPGRG
SAAGSIVAYTLKITDIDPIKYNLLFERFLNPERVSMPDIDIDFCYERREEVIDYVKRKYG
EDHVAQIITFGTMGAKLAIRDVGRVLDIPYNKVDKIAKEIPNALGMTIDKALETNPNLKS
LYEQDQETKTIINISKELEGMLRHASTHAAGVVISKNPIDEYVPLYKHQDAISTQFTMTT
LEELGLLKMDFLGLRTLTVIRDALDLIEKNHGRKIDFSKMDYDDPKVFELLSSGNTLGVF
QMESAGMRSFMKQLKPSNFEDIVAGISLYRPGPMDSIPTYLEYKHNPEKITYIHEKLKPI
MEVTYGCLIYQEQVMEVVRELGGYSYGRSDLVRRAMGKKKMDVMEEERQYFIHGKTDENG
NIEIAGCVRNGVDEQTANKIFDDMIDFAKYAFNKSHAAAYGVIAYETAYLKAHYPVEFMA
ALITSVMGNTDKVVEYIRECNALNIKVLKPDINKSFAKFSVEDNNIRFGLAAVKNVGVNI
INNIVIEREQNGEFTDFINLIKRLDSKDINKRVIESLIKCGGFDEMGYNRASLMMGYEKV
LESVSLERKKNIKGQISLFDGLDGLGQNEEIDRFENSTTSIASIQEFEEREKLALEKEVL
GMYVSGHPLSEYEKELETRTSLNTKKLNEVKENLDKYLAMDQENVIIGGMISNKRIQTTK
RNEIMAFLEVEDLYGSIEVIVFPRILQQYNTIVNEENIVYIKGRLSIQEEENAKIIAQEI
KDISDKTPFIENKKKIYNRQLNENRENLFIKIDDINDKEKLEQIENILKLYPGNEQVFLC
TTVPKKKYRWNGNITISKVLVDNLKQILNENCIKIVTQ
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctgaatttgcacacttgcatgtccatacagaatatagtttactagatggtttt
tcaagggttaagaaactgataaaacgaactaaggaactaggcatgaaatctgttgcgata
actgaccatggaaatatgtttggtgtaatagatttttataaagaagcgaaaaaacaaggt
ataaagcctgtaataggatgtgaattatatacagctcaacgcagtttgacagataaagac
ccaaattttgataaaagatatggtcatttaattttattagcagaaaatatgacaggatat
caaaacttaataaaattagtttcgatatcatatgtagacggattttattataaaccaaga
gttgatatagaagcattgagagaacatagcgaaggaattatatgcttatcagcatgtcta
gcaggtgatgtttcaaatgcattgatgaatagaaactacgaaaaagctaaagaaatagct
ttaacatataacgaaatatttggacaaggtaatttctatttagaattacaagatcataat
ttaccagaacaaaaagaagtaaatgcatctttagtaaaactatcaaaggaattaaatatt
ccattagtagctacaaatgatatacattatgtagataaagctgattcaaaagcacatgat
gttttactatgtattcaaatgggaaaaacattaaatgacccagcaagaatgaggttcgga
acagaagagttttatttaaaatctagagaagaaatggaagagttattcccatatgcatta
gaagcactagataatacagcaaaaatagcagaaagatgtaatgtagaatttgactttaat
acaatacatttaccaaattatgaagttccagaaggatatacaacttcaggatacttagaa
gaattatgctacaaaggattatacgaaagatatgaaaatccgagccaagaaattttagat
agattgaaatatgaattaggtgttattaataaaatgggatacgttgaatatttcttaata
acatgggatttcatcaactttgcaaaagaaaacggaataatggtaggaccgggacgtggt
agtgcggctggttcaatagtagcatatacactaaaaataactgatatagaccctataaaa
tataacttactgtttgaaagattcttaaacccagaacgtgtgtcgatgccggatatcgat
atcgatttttgctacgaaagaagagaagaagttattgattatgttaaaagaaaatacgga
gaagaccacgttgcacagataattacttttggtacaatgggagcgaaacttgccatcagg
gacgttggaagggttttagatataccttataacaaggttgataaaatagcaaaagaaata
ccaaatgcattaggaatgacaatagataaggctttagaaacaaacccaaatttaaagtca
ttatatgaacaagaccaagagacaaaaacaataataaatatatctaaggaattagaaggt
atgcttagacatgcttctacccatgcagcaggtgtagttatatctaaaaatccaattgat
gaatatgtaccattatacaagcatcaagacgctataagtacacagtttactatgactaca
ttagaagagctaggacttcttaaaatggacttcctagggcttagaacattaactgttata
agagatgctcttgatttaattgagaaaaatcacggcagaaaaatagatttctcaaaaatg
gattatgatgatccaaaggtatttgaactactttcttcaggaaatactttaggcgtgttc
caaatggagagtgctgggatgagatcgtttatgaaacaattaaaaccaagtaacttcgaa
gacatagtagctggaatttctctatatagaccgggtccaatggattcaataccaacttat
ttagagtacaaacataatccagaaaagataacatatattcacgaaaaattaaaaccaata
atggaagtaacttatggttgtttaatataccaagaacaggttatggaagttgttagagag
cttggtggatatagttatggacgaagcgacttagttagaagagccatgggtaaaaagaaa
atggatgtcatggaagaagaaagacaatactttatccacggaaaaactgacgaaaatgga
aatatcgaaattgccggatgtgttagaaatggtgtagatgaacaaactgcaaataaaata
tttgatgacatgattgactttgcaaaatacgcatttaacaaatcgcatgcagccgcatat
ggtgttattgcatatgaaacagcgtatttaaaggcacattatccagttgaatttatggca
gcattaattacaagtgtaatgggtaatacagacaaagtagttgaatatataagagaatgt
aatgcattaaatataaaagttttaaaaccggatataaacaaaagttttgcaaaattctca
gttgaggataataatataagatttggacttgcagctgtaaaaaatgtaggtgtaaatata
ataaataatatagttatcgaaagagaacaaaatggcgaatttacggatttcatcaattta
ataaaaagattagacagcaaagatataaataaaagagtaattgaaagcttaattaaatgt
ggtggatttgatgaaatgggatacaatagagccagtttaatgatgggatacgaaaaggta
ttagaaagtgtatctttagagagaaagaaaaatattaaagggcaaatttccttatttgat
ggtctagatggacttggacaaaacgaagaaatagatagatttgaaaattcgacaacttct
attgctagtatacaagagtttgaagaaagagaaaaactagctttagaaaaagaagtatta
ggaatgtatgttagtggacatcctctttctgagtatgaaaaagaattagaaacaagaaca
tcactaaatactaaaaaattaaatgaagtaaaagaaaatttagataaatacctagctatg
gatcaagaaaatgtaataattggaggaatgatttctaataaaagaatacaaactactaag
agaaatgaaataatggctttccttgaagtggaagatttatatggttctatagaagtaatt
gtttttccaagaatacttcaacaatataatactattgtaaatgaagagaatatagtttat
attaaaggtagactaagtatacaagaagaggagaatgcaaaaataatagctcaagaaata
aaagatataagcgataaaactccttttatagaaaataaaaagaaaatatataatagacaa
ctaaatgaaaatagggaaaatttatttatcaaaatagatgacataaatgacaaagagaaa
ctagaacaaatagaaaatattttaaaactttatccaggaaatgaacaagtatttttatgt
acaactgttccaaagaaaaaatatagatggaatggaaatattactatttccaaagtttta
gtcgacaatttgaaacaaatattaaatgaaaattgtattaaaattgtaacacaataa
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