Intestinibacter bartlettii: NQ514_03680
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Entry
NQ514_03680 CDS
T08452
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
ibr
Intestinibacter bartlettii
Pathway
ibr02020
Two-component system
ibr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ibr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NQ514_03680 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NQ514_03680 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ibr03021
]
NQ514_03680 (rpoN)
Transcription machinery [BR:
ibr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NQ514_03680 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_3
FidL_like
MarR
HTH_21
HTH_11
HTH_5
Fe_dep_repress
Linker_histone
Motif
Other DBs
NCBI-ProteinID:
UWO81591
LinkDB
All DBs
Position
729731..731092
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AA seq
453 aa
AA seq
DB search
MKIDYGLEMSQSQKIIVSTNLVQSLKILSMTTLELEDEIKKQAEENPIIEVEMQNSERKV
DWERYINHLKHHTYNDKNESRYNADSKMDFENIISNNQNLYDYLKEQINCYKIDKTEEKV
CEYIIDSLDENGYLKDEDLVIKDLNIDSKIYNRCKKYIQSLEPSGVGGSNLEESLIIQLR
NLDIKDGLLEDIIKNDLNCIGNKKISLICKKYNINKSQCMNYIKLIKSLDPKPCEKFKLK
DIIYIKPDVTVKKIDGEFVLEGNNTNDINIHINSFYKEILNDESSDIVAKEFIKDRLDSA
LNLIKSIEHRKSTTIMIANSILNKQKDFFEKGIHYIKPMKMQELAQELNIHQSTISRGVN
GKYMLTPFGLFEFKYFFSKGLETQETEGVSSISIKKFIKDTIKNEDKSKPLSDEKIKVML
NNQGINIARRTVSKYREELEILPSSKRKTLISK
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagactatggactagaaatgagtcaatcacaaaagattattgtgtctactaat
ttagtacaatctttaaaaattttaagcatgacaacattagaattagaagatgaaataaaa
aaacaagccgaggaaaaccctattatagaagtcgagatgcaaaacagtgaaagaaaagtt
gattgggaaagatatataaatcatttgaaacatcatacttataatgataaaaatgaatct
agatacaatgcagatagtaaaatggattttgaaaatataataagtaataatcaaaattta
tatgactatctcaaagagcaaataaattgctataaaatagataaaactgaggagaaggtg
tgcgaatatataatagatagtttagatgaaaatggatacttaaaagatgaagatttagta
atcaaagatctaaatatagattctaagatatataatagatgcaaaaaatacattcagtcg
cttgaacctagtggagtagggggaagtaatttagaagaatccttgattatacaacttaga
aatttagatataaaagatggattacttgaagatattataaaaaatgatttaaattgcata
ggaaataaaaaaataagtttaatatgcaagaaatacaatataaataaatctcagtgtatg
aattatattaaattaataaaaagtctcgatccgaaaccatgtgaaaagtttaaattaaaa
gatattatatatataaaaccagatgtaacagtaaaaaaaatagatggagaatttgtttta
gagggaaataatacaaatgatataaatatacatataaattcattttataaagaaatatta
aatgatgaaagttcggatattgttgcaaaagaatttataaaagatagattagacagtgct
ttaaacttaataaaaagtatagaacatagaaaatccacaacaataatgatagctaattca
atattaaataagcaaaaagacttctttgaaaagggaatacactatataaaaccgatgaaa
atgcaagaattagcacaagaacttaatatacatcaatcaactataagcagaggggtaaac
ggaaagtatatgttaactccatttggactatttgaatttaaatatttcttttcaaaaggt
ttagagactcaagaaacagagggtgtatcttcaatcagtataaaaaaatttattaaggat
acaataaaaaacgaagataaatcgaaaccattaagtgatgaaaaaataaaagtaatgttg
aataaccaaggtataaatattgcaagaagaactgtttcaaaatatagagaagagttagaa
atattaccatcaagcaaaagaaaaactttgatttctaaataa
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