Intestinibacter bartlettii: NQ514_04475
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Entry
NQ514_04475 CDS
T08452
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ibr
Intestinibacter bartlettii
Pathway
ibr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ibr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NQ514_04475 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ibr03019
]
NQ514_04475 (recQ)
03400 DNA repair and recombination proteins [BR:
ibr03400
]
NQ514_04475 (recQ)
Enzymes [BR:
ibr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NQ514_04475 (recQ)
Messenger RNA biogenesis [BR:
ibr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NQ514_04475 (recQ)
DNA repair and recombination proteins [BR:
ibr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NQ514_04475 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HRDC
RQC
DEAD
Helicase_C
RecQ_Zn_bind
HTH_40
ResIII
MinE
CENP-O
UDPGT
Motif
Other DBs
NCBI-ProteinID:
UWO81746
LinkDB
All DBs
Position
914228..916693
Genome browser
AA seq
821 aa
AA seq
DB search
MKEKVLNILQKYYGYKSFRKGQENIITSILQGEDVLAIMPTGGGKSLCYQIPALCLDGIT
IVISPLISLMKDQVDSLVTMGINACYINSSLSSEDYNNILQGIINDEYKIIYVAPERLES
AEFLNIIKSKEISQIAIDEAHCISQWGHDFRVSYKKIPYFINNLTTRPIITTFTATASTE
VRRDILNMLCLIEPKVFITGFDRENLYINIVKSSAKNKYLLEYVENHKIENGIIYAATRK
EVEKIYEGLLKREINALKYHAGMSNEDRKINQDKFINDEVNIIVATNAFGMGIDKPDIRW
VIHYNMPQSIENYYQEIGRAGRDGEKSECILLFTPGDIHTQKYLIEMGTESMARKTIQYN
KLQQMTDLVYSNSCYRKSILQYFGEIGLDDCKNCSNCLNEGEVIDKTLDAQKVISCVYRM
KKSYGLTMIVDVLRGSKNKKVLELGFNKLSTYGIMKDYTNEGLKTFINTLVSHGFLEVKE
NLGSRGSFPTISLNAQSSKVLKGEIKVQFKEVKIAKEVRNKNELFGILSDLRKTIAVKEK
IAPYMVFGDSTLLSMANTYPTDEDELLNISGVGQIKYEKYGQDFISAIEQYMVDNKIDKS
TLEEDKSNVLNEKEDAKQDFFEVTTDQKLYEQLKKVRGKYARIESLPHRMIMTKNTLKEI
SGRYPLDVEKLNDVAGLGPKKIDKYGEAIIEVVNKYVEENNIDVEWKEKKKKKLILDGES
RKPKEIALDLLNQGIDVKTVSNKLEVSVSSILGYICEYIKDKNELHFKFNPTIYYCDDEK
ELIQKSINKFGEDKLKDIKQSLPDYIKYESIRAVIIEKYIS
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaaaagtactaaatatactacagaaatactatgggtataagagctttagaaaa
ggccaagaaaatataataacaagcatattacaaggtgaagatgtacttgcaataatgcca
actggtggtggaaaatcattatgttatcaaataccagcactttgtttggatggaattaca
atagtaatatcacctctaatatctcttatgaaagatcaagtagattcactagtgactatg
ggaataaacgcttgttatataaacagttctctttcatcagaagactataataatatattg
caaggaataataaacgacgaatataagattatttatgtagcaccagaacgattagaaagt
gctgaatttttaaatataataaaatcaaaagaaatatcacaaatcgcaatagacgaggca
cactgtatatctcaatggggtcatgattttagggtttcatataaaaaaataccttacttt
ataaacaacttaacaactagacctattataactacttttacagcgactgcatcaacagaa
gtaagacgagatatattaaatatgttatgccttatagagccaaaagtatttataactgga
tttgacagagaaaatttatatataaatatagtaaaatcttcggcaaaaaataaatactta
ttagaatatgttgaaaatcataaaatagagaacggaataatttatgctgctacaagaaag
gaagtagaaaaaatttatgaagggcttttaaaaagagaaataaatgctcttaaatatcat
gctgggatgtctaatgaagatagaaaaataaatcaagataaatttataaatgatgaggtc
aatataatagttgcaactaatgcattcgggatgggtattgataaacccgatataagatgg
gtgatacattataatatgccacaaagtatcgaaaattactaccaagagataggtagggcg
ggtagagatggcgaaaaaagtgaatgtattttactttttacaccaggtgatattcacact
caaaaatatcttattgagatgggcacagaaagtatggcgagaaaaacaatacaatacaat
aaacttcaacaaatgacagatttagtttatagcaactcatgttatagaaaaagtatatta
cagtattttggagaaataggtttagatgattgtaaaaattgtagtaactgtttaaatgaa
ggtgaagttatcgataaaacgttagatgcacaaaaggtaatttcatgtgtatatagaatg
aaaaagagctatggacttacaatgatagtagatgtacttagaggttctaaaaataaaaag
gttttagaactaggatttaataaattaagcacttatggaataatgaaagattatactaat
gaagggttaaagacttttataaatacattagtatctcacggatttttagaagttaaagaa
aatctaggttcgagaggaagtttccctactataagccttaacgctcaatcatctaaggtt
ttaaaaggtgagataaaagttcaatttaaagaggttaaaatagctaaagaagtcagaaat
aaaaatgagttatttggaattttatctgatttaagaaagacaatagcagtaaaagaaaaa
atagcaccatatatggtatttggagattcaactttgttatctatggcaaatacatatcct
actgatgaggatgaattattaaatatatctggtgtaggtcaaattaaatacgaaaaatat
ggacaagattttataagtgctattgagcaatatatggttgataataaaatagataaaagt
acactagaagaagataaatcaaatgttttaaatgaaaaagaagatgcaaagcaagatttc
tttgaagttacaacagatcaaaagctatatgaacaacttaaaaaggtaagaggaaaatat
gctagaattgagagtttaccacatcgtatgataatgacaaaaaatacactaaaagaaatt
agtggtagatatccattagatgtagaaaaattaaatgatgttgcgggattaggacctaag
aaaatagataaatatggagaggcaataatagaagttgtaaataagtatgtagaagaaaat
aatatagatgttgaatggaaagaaaaaaagaaaaagaaattgattttggatggtgaaagt
agaaaacctaaagagattgcactggatttattaaatcaaggcatagatgtaaaaactgtt
agtaataaattagaggtttcagtatcttcaattttaggatatatatgtgagtatataaaa
gataaaaatgaacttcactttaaatttaatccaactatatattattgtgatgatgaaaaa
gagttaattcagaaaagtataaacaaatttggtgaagataaattaaaagatataaaacaa
tcactgccagattatataaaatatgaaagtattagagcagttataattgaaaaatatata
agctag
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