KEGG   Intestinibacter bartlettii: NQ514_05230
Entry
NQ514_05230       CDS       T08452                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
ibr  Intestinibacter bartlettii
Pathway
ibr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ibr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NQ514_05230
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ibr03019]
    NQ514_05230
Messenger RNA biogenesis [BR:ibr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     NQ514_05230
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C RMMBL Lactamase_B Lactamase_B_2 Anti-Pycsar_Apyc1 ODP
Other DBs
NCBI-ProteinID: UWO81891
LinkDB
Position
1081173..1082828
AA seq 551 aa
MKSSLKIIPLGGLGEIGKNITAIEYEDEIIVIDCGVSFPDDDMLGIDLVIPDINYLLENQ
DKVKGLFITHGHEDHIGSIPYILKQLNMDIYATRLTIGLIASKLEEHNISKESLIPVKEG
DVIKFNKLSVEFIRATHSIADACSLAIFTPLGTIVHTGDFKIDYTPIDGRVMDLNRLSAL
GEEGVLLLMADSTNVERSGHSLSEKTIGETLNRILDGATGRVIVATFASNIHRMQQIVDA
SLKESRKICFSGRSMENVSKVAMELGYLHIPEEAVISVDELNNHDNNKITIITTGSQGEP
MAGLSRIAYGNHRKIKLERDDLFIISASPIPGNDKMISKVINQLYKKGAEVIYEDLEDVH
VSGHAYQEELKLIHSITKPKYFLPVHGEYRHLKHHADLAKKMGMKGENIFTMENGDVLEI
SEEGAKISGKIRTGVLYVDGIGVGDVGNIVLRDRRNLARDGMVIIVFAIDMENFYLASGP
DVITRGFIYARENEDIINEIKEVSRQKIEECLLEQSTGWQVLKGSVRKSVEVLLFEKTKR
KPSVFPIIMDV
NT seq 1656 nt   +upstreamnt  +downstreamnt
atgaaaagttcattaaaaataattcctctaggaggattaggtgaaatagggaaaaatata
actgcgatagaatatgaagatgaaataattgtgatagattgcggagtatcttttccagat
gatgacatgcttggaatagacttagtcattccagatataaattatttattagaaaatcaa
gataaagtaaaaggtttatttataacacatggtcatgaagatcatataggttcaatccca
tatatattaaaacaactcaatatggatatatatgcaacacgtcttacaatcggacttata
gcgagcaaattagaggagcacaatataagtaaagaaagtttaatacccgtaaaagaaggt
gatgtgataaaatttaataaactgagtgtagaatttataagggcaactcacagtatagca
gatgcatgttcattggcgatttttactccacttggaacaattgttcatactggcgatttt
aaaatagactatactccaattgacggaagagttatggacttaaacagattatcagctcta
ggtgaagagggagtattattgcttatggcagatagtacaaatgtagagagaagtgggcac
tcgctttctgaaaaaacaataggggaaacattaaatagaattttagatggggcgacagga
agggttatagtagctacatttgcatcgaatattcatagaatgcaacaaatagtagatgca
tcattaaaagaaagcagaaaaatttgttttagcggaagaagtatggaaaatgtaagcaag
gtagctatggagcttggttatttacatattccagaagaggctgtaataagtgtggatgaa
ttaaataatcatgataacaataaaataactataataactactggcagccaaggggaacct
atggctgggctttcaagaatagcttatggaaatcacagaaaaataaaattagaacgcgat
gatttatttataatttcagcatcacctatacctggaaatgataaaatgatatcaaaggta
ataaatcaactttataaaaagggagcagaagttatatatgaagatttagaagatgtacat
gtttctggtcatgcatatcaagaggaattaaaattaattcattctataacaaagcctaaa
tattttctaccagtccacggcgaatatcgtcatcttaaacaccatgctgatttggcaaaa
aagatgggcatgaagggcgaaaatatatttactatggaaaatggagatgtgcttgaaata
agtgaagaaggcgcaaaaatatctggaaaaatacgtacaggtgtactttatgtagatgga
ataggtgttggagatgtaggaaatatcgtattaagagatagacgtaatttagcaagggat
ggtatggtaataatagtatttgctatagatatggaaaatttctatcttgcttcggggcca
gatgttataacaagaggatttatatatgctagagaaaatgaagatataataaatgaaata
aaagaagtatcaagacaaaaaatcgaagaatgtctattagaacaatcaacaggatggcag
gtattaaagggaagtgtaagaaaatctgttgaagtactgctttttgaaaaaacaaaaaga
aaaccaagtgtatttcctattataatggatgtatag

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