Intestinibacter bartlettii: NQ514_05360
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Entry
NQ514_05360 CDS
T08452
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
ibr
Intestinibacter bartlettii
Brite
KEGG Orthology (KO) [BR:
ibr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ibr03400
]
NQ514_05360 (addA)
Enzymes [BR:
ibr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NQ514_05360 (addA)
DNA repair and recombination proteins [BR:
ibr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
NQ514_05360 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
ResIII
DEAD
AAA_12
AAA_30
AAA_16
Motif
Other DBs
NCBI-ProteinID:
UWO81917
LinkDB
All DBs
Position
1116041..1120090
Genome browser
AA seq
1349 aa
AA seq
DB search
MSSPKWTQEQQNVIDSRGGNLLVAAAAGSGKTAVLVERIIQMILNSDLKIDIDKLLVVTF
TNAAASEMRERIGDAISKKLDENPEDEHLQDQLVLLNKASITTIHSFCLEVIKSNFHKIN
LDPNFRIGDETECSLMKLEAIDETFDILYEQNDEEFCYLVDCYAEKRGDSNLQNLILSIY
SFVMSSPYPKVWLKESAEDFNITDDFDFATSKWAKAILETVKIQMEGIEKSLCKAIEDVY
GIDELVTFTDKLKIEYEKIKEILYACDTSWSDAYRQISSMTFENYAKGVKRIPKDAPSYI
KEEKDKAKKIRDNAKKSIEKIKTSVFNKNYDDLKDEIKFLYPIVKSLSDVVLMFEQIYSQ
KKRDKGIIDFNDIEHFALQILTETDENGDFVFDEEGKNIPSDIALEYREKFYEIFIDEYQ
DSNQVQEVILSTIAKQKEPNRFMVGDVKQSIYRFRQAKPEIFLQKYATYDTDLSSKYKKI
MLYKNFRSRKEVVDSVNYIFEHIMSKNLGEIDYNEEEKLNLGANFEEVEDEKIILGGATE
IHLMEKKVPEVEDPDEEEEEGEDLDASQIEARMVGKIIRDIMRPNENCEIMQVFDKKLET
YRNVEYKDIVILLRATSAWAPVFAEELINMDIPTYADMGQGYFETMEIQVIMSFLKVIDN
PMQDIPLIAILRSPIYGFTPEDFIDIRITDKKVSFYEAMRMFVGEKIDLSNEEEQDIAED
EISDDIGNEIIDVNINEENSYVDADMDDYYQNINYEDFEYENEEFIYNDEVIYESYINEN
VEDDLIYEINSNIEGDEESQKSELELKVRRFLDDLKELQEKSMYMSTDEFLWYIYTNSGY
YAYCGALPGGSQRQANLRILFERAKQFEETSFKGIFNFINFISKLKKSNSDMGSAKTLGE
NANVVRIMSIHKSKGLEFPIVICSGMGRNFNTMDFRKDVLYHHELGYGPQIVDFERRISY
PSIAKEALKCKINIENISEEMRILYVALTRAKEKLIITSSIKDIEQNMHKWSSNISTEKM
VSKYDILNGKNYMDWMMPAIIKHKDLEDIRETYNLSTSISMEDESKWSVKTWSRDDIDFE
KHEKEGIREVLNTMDLSQHDTEYYEQIEKKLNFEYPYLGVVKKAASISVTEIKKRQEEYE
EQEDSLGLYKHKTTLKKPKFLSESQKSEKITGARRGTIVHLIMEVLDFEKVNTESEIKAQ
IQDLVKRRIITEKESQVLSPRKIMRFFKSPIAKRMLSSKFVKREQKIYTQIKMNDIYLND
EIFKNNRETYENESVMLRGVIDLYFEEDDGLVILDYKTDFVDKNNKKEIIHKYKKQIEIY
ADVLSKLTGKKVKEKYLYLFGIDEQVKVD
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atgagttctccaaaatggacacaggaacaacaaaatgttatcgatagtagaggtgggaac
ttgttagttgctgctgcagctggttctggaaaaactgccgtacttgtagaacgtataata
cagatgattttaaattcagatttaaaaatcgatatagataaattattagtcgttacattt
acaaatgcagctgcctctgaaatgagggagagaataggagatgcgatatctaagaaatta
gatgaaaatccagaagacgagcatcttcaagaccaattagtgcttttaaacaaagcgagt
ataactacaattcactcgttttgtctagaagttataaaatcaaatttccacaaaataaat
ttagatcctaatttcagaataggtgatgaaacagaatgttcacttatgaaattagaagct
attgatgagacatttgatattctttatgagcaaaatgatgaagaattttgctacttagta
gattgctatgctgaaaaaagaggtgactcaaacttacaaaacttaattttatctatatac
agttttgttatgtcatctccatatccaaaagtatggttaaaagaaagcgcagaggatttt
aatataactgatgatttcgactttgcaacatcaaaatgggcaaaagctatacttgaaacg
gttaaaatacaaatggaaggtatagaaaagtcactttgcaaagctatagaagatgtatat
ggtatagacgaattagtaacttttactgataaattaaaaatagaatatgaaaaaataaaa
gaaatactatacgcatgcgacacttcatggagcgatgcatatagacaaatatcatctatg
acttttgaaaactatgcaaaaggagttaaaagaataccaaaagatgcgccatcttatata
aaagaagaaaaagataaagcgaagaagataagggacaatgcaaaaaaatctattgaaaag
ataaagacatctgtatttaataaaaattatgatgacttaaaagacgaaataaaattctta
tatccaatagttaaatctctatctgatgtggttcttatgtttgaacagatatacagccag
aaaaagcgtgacaaaggtattatcgactttaacgatatagaacattttgcgctacaaatt
ctgactgaaacggatgaaaatggagactttgtatttgacgaagaaggcaaaaatattcct
tcagatatagcacttgaatacagagaaaaattctatgaaatatttatagatgaatatcaa
gatagtaaccaagttcaagaggttatactatcaactattgcaaaacaaaaagaaccaaat
agatttatggttggtgacgtaaagcaaagtatatatagatttagacaagcaaaaccagag
atattcctccaaaaatatgctacttatgatactgatttatctagcaaatataaaaaaata
atgctttataaaaacttcagaagtagaaaagaagtagttgacagtgttaactatattttt
gaacatataatgagcaaaaatttaggtgaaatagattataacgaagaagaaaaactaaat
ttaggagcaaattttgaagaagtagaagatgaaaaaataatactaggtggggctactgaa
atacacttaatggagaaaaaagtacctgaagttgaagatccagacgaagaagaggaagaa
ggcgaagatttagatgcaagtcaaattgaagctagaatggttgggaaaataataagagat
attatgagacctaatgaaaattgcgagataatgcaggtatttgataaaaagctagaaact
tacagaaacgtagaatataaagatatagtaatactacttagagcgacatcagcatgggcg
ccagttttcgccgaagaattaataaatatggatataccaacatatgcagatatgggacaa
ggttactttgaaacaatggaaatacaagttataatgtcattcttaaaagtaatcgacaac
ccaatgcaagatattccactaattgcgatattacgttcacctatatatggatttacacca
gaagattttatcgatataagaattacagataaaaaagttagtttctatgaagctatgagg
atgtttgttggtgaaaaaatagatttaagtaatgaagaagaacaagatatagctgaagat
gaaataagtgacgatataggtaatgaaataatagatgtaaatataaatgaagaaaatagc
tatgtggatgctgatatggatgattattatcaaaatatcaattatgaagattttgaatat
gaaaatgaagaatttatatacaatgatgaagttatatatgaatcgtatataaatgaaaat
gtagaagacgatttaatttatgaaataaactcaaatattgaaggagatgaagaatctcaa
aagagtgaacttgaattaaaagtaagaagatttttagatgatttgaaagaacttcaagaa
aaatctatgtatatgagcactgatgaattcttatggtatatatatacaaatagtggatat
tatgcatattgtggagcattgccaggtggaagccaaagacaagcaaatttaagaatacta
tttgaaagagcaaaacaatttgaagagacaagctttaaaggaatttttaactttataaac
tttataagtaaattaaaaaaatcaaattctgatatgggaagcgcaaaaactttaggtgaa
aatgccaacgtagtcagaataatgagtatacacaaaagtaaagggcttgaattcccaata
gttatctgttctggaatgggaagaaactttaatacaatggactttagaaaagatgtatta
tatcatcatgaacttggatatgggcctcaaattgtggactttgaaagaagaatctcttat
ccaagtattgcaaaagaagccttaaaatgcaaaataaatatagaaaatatatcagaagag
atgaggatattatatgttgctcttacaagggcaaaagaaaaattaataataacatcatct
ataaaggatatagaacaaaatatgcataaatggtcatcaaatatatcaactgaaaagatg
gtttcaaaatacgatatattaaacggcaaaaactatatggactggatgatgccagcaatt
ataaaacataaagatttagaagatattagagaaacttataatctatctacatctataagt
atggaagatgaatcaaaatggtctgtaaaaacttggagtagagatgatatagattttgaa
aaacacgaaaaagaaggaataagagaagttctaaatactatggatttatcacagcatgat
acagaatactacgagcaaatagagaaaaaactaaacttcgaatatccttatttaggagtt
gtgaaaaaggctgctagtatatctgtaacagagataaagaaaagacaagaagagtatgaa
gaacaagaagactctcttggcttatacaaacataaaactacacttaaaaagccaaaattc
ttaagtgaatcacaaaaatcagaaaaaataacaggtgcaagaagaggtactatagtccat
ttaataatggaagttttagactttgaaaaggtaaatacagaaagtgaaataaaagcacag
attcaagatttagtaaaaagaagaattataacagaaaaagaatctcaagttttatcacca
agaaaaataatgagatttttcaaaagcccgatagctaagagaatgttatcatcaaaattt
gtaaaaagagaacaaaagatatatactcaaataaaaatgaacgatatatatctaaatgat
gaaatatttaaaaataatagagaaacatacgaaaatgaatcagttatgcttaggggtgtt
atagatttatactttgaagaagatgatggactagttatattagattataagacagacttt
gtagacaaaaataataaaaaagaaataatacataaatataaaaaacaaatagaaatttat
gcagatgttctttctaaattgacgggtaaaaaggtaaaagaaaagtatttgtatttattt
ggtatagatgaacaagtaaaagttgattaa
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