Intestinibacter bartlettii: NQ514_06610
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Entry
NQ514_06610 CDS
T08452
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ibr
Intestinibacter bartlettii
Brite
KEGG Orthology (KO) [BR:
ibr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ibr03032
]
NQ514_06610 (topA)
03400 DNA repair and recombination proteins [BR:
ibr03400
]
NQ514_06610 (topA)
Enzymes [BR:
ibr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NQ514_06610 (topA)
DNA replication proteins [BR:
ibr03032
]
Prokaryotic type
DNA Topoisomerases
NQ514_06610 (topA)
DNA repair and recombination proteins [BR:
ibr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NQ514_06610 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
FtsK_SpoIIIE_N
Toprim_4
Zn_ribbon_recom
Ig_TMM62
Motif
Other DBs
NCBI-ProteinID:
UWO82156
LinkDB
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Position
1379559..1381637
Genome browser
AA seq
692 aa
AA seq
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MAKSLVIVESPAKAKTIEKFLGKSHYTVKASVGHVRDLPKSQLGVDIENNFEPKYINIRG
KGDVIKELKKEAKKAKKVYLATDPDREGEAISWHLSYILNIDEEEKCRIEFNEITKDAIK
KAIKSPRNINLNLVDAQQARRVLDRLLGYQISPILWQKVRKGLSAGRVQSVTTKLICERE
EEIKAFEPKEYWSIELIASNKEENNLTLKFYGKDNEKIELENEEQVKEILKTIENGSLVV
TKIESRSRRKSAPKPYTTSVLQQDAANKLYFTTKKTMMVAQELYEGIDVKGEGTVGLISY
IRTDSKRISEEAREKAKGYIIESIGENYYKDHAKDSKGKKEKKVQDAHEAIRPTSVDRTP
DSIKDSLSKEQYKLYNLIWRRFVASQMEDSVFDVLNVECKIEDLIFKATGSKLKFDGYTK
IYNFTEREDKILPSLDEGEILKIQEYNPQQHFTSPPPRYTEASLVKTLEELGIGRPSTYA
PTITTILNREYVEKDGASLVPTELGIIVTKILDENFQKFMEVDFTADMESQLDQIEEGNV
EWKKVVEEFYSPLAEAIRVAIEKIEKVNMDEETDEICELCGSNMVIKYGRFGKFMACKNY
PECKNTKPIVSKIGVKCPKCKEGDIIMRKSKKKKVFYGCSNYPDCDFVAWNKPVEEPCEV
CGSYMYEKYSKSGTKIVCSNKECKHEKIIEQD
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaatcattagtaattgttgagtcgccagcaaaggctaaaacaatagaaaaattt
ttggggaaaagtcattatacagtaaaggcatctgtaggacatgtaagggatttgcctaag
agtcagttaggtgtagatatagaaaataactttgaaccaaaatatataaatataagaggt
aaaggtgatgtaatcaaggagctaaaaaaggaagctaaaaaagctaaaaaagtttatcta
gctaccgaccccgatagagaaggagaagctatctcatggcacttatcttatattttaaat
atagatgaagaagaaaaatgcagaatagaatttaatgaaattacaaaagatgctataaaa
aaagctataaaaagtccaagaaatataaatttaaatttagtggatgcacaacaagctaga
agggttttagatagattattaggataccaaataagtccgatattatggcaaaaagttaga
aaaggtctaagtgcaggtagagttcaatctgtaactactaagttaatatgtgaaagagaa
gaagaaataaaagcttttgaacctaaagaatattggagtatagaacttattgcatcaaat
aaagaagaaaataacttgacactaaaattctatggaaaagacaatgaaaaaatagagcta
gaaaatgaagaacaagtaaaagagatattaaaaacgatagaaaatggaagcttagttgta
actaaaatagaatctagaagtcgtagaaaatctgctccaaaaccatatacaacaagtgtg
cttcaacaagatgctgctaataaattgtattttacgactaaaaagactatgatggtagct
caagaactttatgaaggtatagatgtaaaaggtgaaggaacagtaggtctaatatcttac
ataagaacagactctaagagaatatctgaagaagctagagaaaaagccaaaggttatata
atagaatctataggagaaaattactacaaagatcatgcaaaagatagtaaaggtaaaaaa
gaaaaaaaggttcaagatgctcatgaagcgattagacctacttctgtagatagaacacca
gatagtataaaagattctttaagtaaagagcagtataaattatacaacttgatttggaga
agatttgtagcaagccaaatggaagattcagtatttgatgtattaaatgttgagtgtaaa
attgaagatttaatatttaaagcgacaggttctaaattaaaatttgacggatatacaaaa
atatataactttacagagagagaagataaaatacttccaagtttagatgagggggaaatt
ttaaaaatacaagaatataatcctcaacaacattttacttctccaccaccaagatatact
gaagctagtttagtaaaaactttagaagaacttggaataggaagaccaagtacttatgca
ccaactattactactatattaaatagagagtatgttgaaaaggatggtgctagtttagtt
ccaacagagctaggtataatagtaacaaaaatactagatgaaaacttccagaaatttatg
gaggtagattttactgctgatatggagtctcaattagatcaaattgaagaaggaaatgta
gagtggaaaaaggtagtcgaagaattctattcaccattagctgaagcaattagggttgca
attgaaaagattgagaaagtaaatatggatgaagaaactgacgaaatttgtgaactatgt
ggttctaatatggtgataaaatacggcagattcggtaaatttatggcatgtaaaaattat
cctgaatgtaaaaatacaaagcctatcgtaagcaaaattggtgtaaaatgcccaaaatgc
aaagagggcgatattataatgagaaaaagtaaaaagaaaaaggtattctacggttgttct
aactatccagattgtgattttgtagcatggaataaaccagttgaagagccttgtgaggtt
tgcggttcttatatgtatgaaaaatattctaaatcaggaactaaaatagtctgttcaaat
aaagaatgtaaacatgaaaaaattattgaacaagactaa
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