Intestinibacter bartlettii: NQ514_06795
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Entry
NQ514_06795 CDS
T08452
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ibr
Intestinibacter bartlettii
Pathway
ibr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ibr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NQ514_06795 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ibr03019
]
NQ514_06795 (pnp)
03016 Transfer RNA biogenesis [BR:
ibr03016
]
NQ514_06795 (pnp)
Enzymes [BR:
ibr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NQ514_06795 (pnp)
Messenger RNA biogenesis [BR:
ibr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NQ514_06795 (pnp)
Transfer RNA biogenesis [BR:
ibr03016
]
Prokaryotic type
tRNA degradation factors
NQ514_06795 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_2
DUF1773
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
UWO82193
LinkDB
All DBs
Position
1419268..1421373
Genome browser
AA seq
701 aa
AA seq
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MFEHKIFTMELAGRELSVEIGKIAQLASGSAILKYGETMVMVNVSKSAEPREGVDFFPLS
VDYEEKLYSVGKIPGGFLKREGKASEKATLTSRLIDRPIRPLFPKGFRNDVQVVATVLSV
DHDCTPDVVAMIGSSVALSISEIPFNGPTGSVNVGLVDGALVINPTAEQREKSSLHLTVS
GTKDAVMMVEAGADEVPESLMLEAILTAHEEIKKIVAFIEEIVAEVGKEKMEFIEPKADE
DIEAKVRELATDKMKEAVRVIEKLERQEAMDAVKNEVLDSFDEEALEEFGGDIVAVLDKI
IKEEVRKMIVHEGRRPDARKTDEIRPIWCDCGFIPRTHGSGLFTRGQTQVMTITTLGALG
DVQILDGLDEEESKRYMHHYNFPAYSVGEVRPSRGPGRREIGHGALAERALLPVIPSKEE
FPYAIRLVSEVLSSNGSTSQGSVCGSTLSLLDAGVPIKDMVAGIAMGLIEQDGKIAILSD
IQGMEDHLGDMDFKVAGTEHGITAIQMDIKIAGIDEEILRTALAQARVGRLHILNEMRKT
IDAPRPHLSKYAPKIITMNINPDKIRDVIGPGGKVITKIIDETGVKIDIEQTGEVFISGI
DQEMIDLAQKKISDIVAEVEVGQVYKGKVTRILNFGAFVELLPGKEGLLHISHIAHERVN
KVEDVLNIGDEVEVKVTEIDEKGRVNVSRKALLPKPKKDHK
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaacataaaatttttacaatggaattagcaggcagagaactgtctgtggagata
ggtaaaatagcgcaattagcaagcggaagtgctatacttaaatacggggagactatggta
atggtcaatgtatctaagtcagctgaaccaagagaaggagtagatttcttccctctaagt
gtcgattatgaagaaaaattatattcagttggtaaaataccaggtggattcttaaaaaga
gaaggtaaagcatctgaaaaagcgacacttacatcaagacttattgatagaccaataaga
ccattattcccaaaaggatttagaaatgatgtacaagttgttgcaactgtattatcagta
gatcacgactgcacaccagatgtagtagctatgataggttcatcagtagctttatcaata
tcagaaataccatttaacggaccaactggttctgtaaatgtaggtcttgttgatggagca
ttagtaataaatcctactgcagaacaaagagaaaaaagttcactacaccttactgtttca
ggaacaaaagatgcagtaatgatggttgaagcaggggcagacgaagtaccagaatcatta
atgcttgaagcgatacttacagctcatgaagaaatcaaaaaaatagttgcatttatagaa
gaaatagtagcagaagttggtaaagaaaaaatggaattcatagagccaaaagctgatgaa
gatatagaagcaaaagttcgtgaattagctactgacaaaatgaaagaagctgtaagagta
atagaaaaattagaaagacaagaagctatggacgctgttaaaaatgaagttctagatagt
tttgatgaagaagcactagaagaatttggtggcgatatagtagctgttttagataaaata
ataaaagaagaagttagaaaaatgatagtgcatgaaggtagaagacctgatgctagaaaa
actgatgaaataagaccaatatggtgtgactgtggatttatacctagaactcacggttca
ggattattcacaagaggtcaaactcaagtaatgacaataacaactctaggagcacttgga
gatgttcaaatacttgatggattagacgaagaagaatctaaaagatatatgcaccactac
aacttcccagcatactctgtaggtgaagttagaccatctagaggtccaggaagaagagaa
atcggtcacggtgcattagcagaaagagcattacttccagtaataccatctaaagaagag
ttcccatatgcaataagacttgtatcagaagtattaagttcaaatggttctacttctcaa
ggtagtgtttgtggttcaactttatcgcttttagatgcaggtgtacctataaaagatatg
gttgcaggtatagcaatgggtcttatagaacaagatggaaaaatagctatactttcagat
atacaaggtatggaagatcacttaggagatatggactttaaagttgctggtacagaacat
ggtataacagctatacaaatggatataaaaatagctggtatagatgaagaaatactaaga
acagctcttgcacaagctagagtaggtagactacacatattaaatgaaatgagaaaaact
atagacgctccaagaccacatttatctaaatatgcacctaaaataataactatgaatata
aatccagataaaataagagacgttataggaccaggtggaaaagttataactaaaataata
gatgaaactggtgttaaaatagacatagaacaaactggtgaagtatttatatcaggtata
gatcaagaaatgatagatttagcacaaaagaaaatatcagatatagttgcagaagtagaa
gtaggacaagtatataaaggtaaagtaactagaatacttaacttcggtgcttttgtagaa
ttacttccaggtaaagaaggtctacttcatatatctcatatagctcatgaaagagtaaat
aaagttgaagatgtattaaacattggtgatgaagtagaagttaaagttactgaaatagat
gaaaaaggaagagttaatgtatctagaaaagcattacttcctaaaccaaaaaaagatcat
aaataa
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