Intestinibacter bartlettii: NQ514_12960
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Entry
NQ514_12960 CDS
T08452
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ibr
Intestinibacter bartlettii
Pathway
ibr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ibr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NQ514_12960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ibr03019
]
NQ514_12960
03009 Ribosome biogenesis [BR:
ibr03009
]
NQ514_12960
Enzymes [BR:
ibr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NQ514_12960
Messenger RNA biogenesis [BR:
ibr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NQ514_12960
Ribosome biogenesis [BR:
ibr03009
]
Prokaryotic type
rRNA helicases
NQ514_12960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
UWO80815
LinkDB
All DBs
Position
complement(2765921..2767546)
Genome browser
AA seq
541 aa
AA seq
DB search
MNITKFEDLPISDEIKRSIAEIGFEEPSPIQAQSIPVILSGKDVIGQAQTGTGKTAAFSI
PILEKVDPNNKHLQAIVLCPTRELAIQVSKEIRKLGKFKSGIKTLPVYGGQPIDRQIKAL
KSGVQVVIGTPGRVIDHINRKTLKLDDVKMVVLDEADEMLDMGFREDIELILNQTPIERQ
TTFFSATMPKEILELTKLYQHEPEIIKVVRKELTVPNIKQFYIETRRANKLEVLCRLIDV
YNPKLSVVFCNTKRGSDELVSELQARGYFADALHGDLKQTQRDIVMDKFRQGTIDILVAT
DVAARGIDVDDVDMVFNYDLPQDEEYYVHRIGRTGRAGREGVSFSFVYGKEMRKMRDIER
YTKCKLVKHSIPTIADVEEKKVAAFFKQVKDTVNESNLAKQINWVEALCEEQELSTLEVA
AALVKLAMGEELKEEIIEEPSRKEARKSKKAKKGSTGAERGMVRLFINVGRKQRVQAKDI
VGAIAGEAGISGKLVGTIDIYDKYTFVEVPKANAKKVLEKLKNVKIKGNKINIEKANKKN
K
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgaatataacaaaatttgaagatttaccaattagtgatgagataaaaagatcaattgct
gaaataggatttgaagaaccatcaccaatacaagctcagtcaatacctgtaattttatca
ggaaaagacgttataggacaagctcaaacaggtacaggaaaaactgcggcatttagtata
cctatacttgaaaaagtagacccaaacaataaacatttacaagcaatcgtattatgccct
acaagagaacttgctatacaagtttctaaggaaataagaaagcttggtaagtttaagagc
ggaattaaaacattaccagtttacggtggtcaaccaatagatagacaaataaaagcatta
aagagtggagtacaagttgtaataggaactccaggacgtgtaatagatcatataaacaga
aaaactttaaaattagatgatgttaaaatggtagtgcttgatgaagcggacgaaatgcta
gacatgggattcagagaagatatcgagttaatattaaaccaaactccaatagaaagacaa
actactttcttctcagctacaatgccaaaagaaatattagaattaactaaattataccaa
catgaaccggaaataataaaagtagttagaaaagaacttacagttccaaatataaaacaa
ttctacattgaaactagaagagcgaataaattagaagtattatgtagattaatagatgta
tataatccaaaattatcagttgtattctgtaatacaaaaagaggttctgatgaattagta
agtgaacttcaagctagaggatactttgcagatgcattacacggtgaccttaaacaaact
caaagagatatcgtaatggataaatttagacaaggtacaatagatatattagttgctaca
gatgttgctgctagaggaatagatgtagatgacgtagatatggtatttaactatgattta
ccacaagacgaagaatactatgttcacagaataggtagaactggtcgtgctggtagagag
ggtgtatctttcagtttcgtatatggaaaagaaatgagaaaaatgagagatatcgaaaga
tatactaaatgtaaattagttaaacatagtataccaactatagcagacgttgaagaaaag
aaagttgctgcattctttaaacaagttaaagatacagtaaatgaaagcaatttagcaaaa
caaataaactgggttgaagctctatgtgaagaacaagaattatcaactttagaagttgct
gctgcattagttaaattagctatgggtgaagaattaaaagaagaaataatagaagaacca
tctagaaaagaagctagaaaatctaaaaaagctaaaaaaggttcaactggtgctgaacgt
ggaatggttagactatttataaatgttggtagaaaacaaagagttcaagctaaagatata
gttggtgctatagctggagaagctggaatatctggaaaattagttggaacaatagatata
tatgataaatatacatttgttgaagttccaaaagcaaacgctaaaaaagttttagaaaaa
ttaaaaaatgttaagataaaaggaaataaaattaacatagaaaaagcaaataaaaaaaat
aaataa
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