Intestinimonas butyriciproducens: IB211_00129c
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Entry
IB211_00129c CDS
T04182
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ibu
Intestinimonas butyriciproducens
Pathway
ibu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ibu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IB211_00129c
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ibu03019
]
IB211_00129c
Enzymes [BR:
ibu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
IB211_00129c
Messenger RNA biogenesis [BR:
ibu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IB211_00129c
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ALP92525
UniProt:
A0A0S2VZK2
LinkDB
All DBs
Position
complement(131094..132899)
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AA seq
601 aa
AA seq
DB search
MNFKDLGLIAPILRALDAQGYAEPTPIQAGAIPPALLGRDVLGCAQTGTGKTCAFATPIL
QRLNADVVVGPRYIRSLILTPTRELALQIQESFEAYGRNLPLRSAVIFGGVGQQPQVDKI
KRGLDILVATPGRLLDLQGQGLLDLSRVELFVLDEADRMLDMGFIHDVRRVLKLLPPKKQ
TLFFSATMPPEVMDLVNGLLHDPARVAVDPVSSPVEVIDQKLCFVDKGNKSKLLSHLIRE
MRVKNALVFTRTKHGANKVAGDLMKAGISAAAIHGNKSQTARQQALSDFKAGRIQVLVAT
DIAARGIDIEELSHVFNYNLSEVPETYVHRIGRTGRAGHGGCAVSFCDFAEKEYLRGIEK
LIGRKIPVVEEHPWPMEVFEAPRDAKGRAVNADDAEARAAAKERRRARDAAAKAAAEEEQ
RRGAEPAKSPAAKPQKVQAVPVSAPKGEGGRKRRAPRWQKAEGELSHKLDAVLPERTAGT
SEAGYEDFRRPDPLGSDRIMDATARLLSPRSVPAQKGRVQAPQERVGKKHRRKKSSSAQS
VSPAPRPREEKASAPAPAPKKRQDHGRGHRGGPAPLPMKSGAVKDSTEQPSLMKPYYIEH
D
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgaattttaaggatctggggcttatcgcccccattctccgggcgctggacgcccagggc
tatgccgagcccacccccattcaggcgggggccatccccccggcgctgctgggccgggac
gtgctgggctgcgcccagacgggcaccggcaagacctgcgcctttgccacccccatcctc
cagcgtctcaacgccgatgtggtggtgggcccgcggtatatccgctccctgatcctcacc
cccacccgggagctggccctccagatccaggagagctttgaggcctacgggaggaatctg
ccccttcgctccgccgtcatcttcggcggcgtgggccagcagccccaggtggacaagatc
aagcggggcctggacattctggtggccacgcccggccgtctgctggacctccagggtcag
ggcctgctggacctgagccgggtggagctcttcgtcctggacgaggccgaccgcatgctg
gacatggggtttatccacgatgtccgccgggtactcaagctcctcccgccgaaaaagcag
accctctttttctccgccaccatgccccccgaggtcatggacctggtgaacggccttctg
catgaccctgcccgggtggcggtggacccggtgtcctccccggtggaggtcatcgaccag
aagctctgctttgtggacaagggcaacaagtccaagcttctctcccacctcatccgggaa
atgcgggtcaaaaatgctctggtgttcacccgcaccaagcacggggccaataaggtggcg
ggagacctgatgaaggcgggcatctccgccgccgctatccacgggaacaaatcccagacc
gcccggcagcaggcactcagcgacttcaaggccggtcggatccaggtcctggtggccacc
gacatcgccgcacggggcatcgacatcgaggagctctcccacgtattcaattacaatctt
tccgaggtccccgagacctacgtccaccgcatcggccgcaccgggcgggccggccacggg
ggctgcgccgtctccttctgcgacttcgccgagaaggagtacctcagggggatcgaaaag
ctgatcggccggaaaatccccgtggtggaggaacacccctggcccatggaggtctttgag
gcccccagggacgccaaggggcgggccgtgaacgccgacgatgcggaggcccgcgccgcc
gccaaggagcgccgccgggcccgtgacgcggccgcaaaggccgccgcggaggaggagcag
cgccggggggcggagccagccaagtcgcccgcggcaaagccccaaaaggtccaggcggtc
cccgtgtccgcgccaaagggggagggcggcaggaagcgccgcgctccccgctggcagaag
gcggagggggagctctcccacaagttggacgccgtgcttcccgaacggaccgccggcacg
tcggaggccggatatgaggatttccgccgccccgatcccctcggctccgaccgcattatg
gacgccaccgcccggctgctgtccccccggtccgtgcccgcacagaagggccgtgtccag
gcgcctcaggagcgcgtcgggaagaaacacaggcggaaaaagtcctcctccgcccagtcc
gtctctccggcaccccgtccccgggaggaaaaagcgtccgccccagcgcccgcacccaag
aagcgccaggaccatggccgcggtcatcggggcggcccagcccccctgcccatgaagagc
ggagcggtgaaggactccaccgagcagcccagtctgatgaagccctattatattgagcac
gattaa
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