Intestinimonas butyriciproducens: IB211_00536c
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Entry
IB211_00536c CDS
T04182
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ibu
Intestinimonas butyriciproducens
Pathway
ibu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ibu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IB211_00536c
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ibu03400
]
IB211_00536c
DNA repair and recombination proteins [BR:
ibu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IB211_00536c
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IB211_00536c
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
FlaG
AAA_30
DUF87
HEM4
AAA_22
FAM76
Motif
Other DBs
NCBI-ProteinID:
ALP92931
UniProt:
A0A0S2W0N7
LinkDB
All DBs
Position
complement(516496..518463)
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AA seq
655 aa
AA seq
DB search
MPDFKVVSPYEPAGDQPEAIAALAAGIENGLSEQALLGVTGSGKTFTMAKVIEKVQKPTL
VLAHNKTLAAQLCAEFKEFFPDNAVEYFVSYYDYYQPEAYIPHTDTFIEKDSATNDEIDR
LRLSATASLIERRDVIVVSSVSCIYGLGEPDDYAKMMVPLRVGAEFPRDELLRRLVEIRY
ERNDIAFERNMFRVRGDTVEVWPAYFKDTAIRIEYFGDEIDRLSEINVVTGTPVRRLEHL
PIFPASHYITPKEKMDKAIGEIYRELEERVAFFESRNMLVEAQRIKQRTLYDIEMMQELG
YCSGIENYSRVIAGRPVGSAPMTLMDYFPKDFLLFIDESHVTLPQVRAMYNGDRARKTTL
VDYGFRLPCAFDNRPLKFEEFEQRVNQVVYVSATPGEYERTRAGQIVEQVIRPTGLLDPR
IDVRPVEGQIDDLIGEINDRTARKERVLVTTLTKKMAEDLTAYLKNAGIKVQYMHHDIDT
IERQEIIRDLRLGTYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSETSLIQTIGRA
ARNADGLVVMYADKMTPSMMAAIGETERRRKKQDAYNRARGIVPRTIIKSVRDVIELSAE
EEETEQLMRRKTKLSKKERDAAVEKLEKEMREASKRLEFEYAAVLRDRIIELRGQ
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgcctgactttaaagtggtctccccctatgagcccgccggggaccagcccgaggccatc
gcggccctggccgcgggcatcgagaacgggctgagcgagcaggccctgctgggcgtcacc
ggctccggcaagaccttcaccatggccaaggtcatcgagaaggtccagaagcccaccctg
gtgctggcccacaacaagacgctggccgcccagctctgtgccgagttcaaggaattcttc
ccggacaacgccgtggaatatttcgtcagctactacgactactatcagcccgaggcctat
atcccccacaccgacaccttcatcgagaaggactccgccaccaacgatgagatcgaccgg
ctgcgtctctccgccaccgcctccctcatcgagcggcgggacgtcatcgtggtctcctcc
gtctcctgcatctacggcctgggcgagccggacgactatgccaagatgatggtccccctg
cgggtgggcgccgagttcccccgggatgagctcctcaggcgcctggtggagatccgctac
gagcgcaacgacatcgcctttgagaggaacatgttccgggtgcggggggacacggtggag
gtctggcccgcctatttcaaggataccgccatccgcattgagtacttcggcgacgagatc
gaccgcctcagcgagatcaatgtggtcaccggcaccccggtccggcggctggagcacctg
cccatcttccccgccagccactacatcacccccaaggagaagatggacaaggccatcggg
gagatctaccgggagctggaggagcgggtggccttctttgagtcccggaacatgctggtg
gaggcccagcgcatcaagcagcgcaccctctacgacattgagatgatgcaggagctgggc
tattgctccggcatcgagaactactcccgcgtcatcgccgggcggcccgtgggttccgcc
cccatgaccctgatggactacttccccaaagattttctcctgttcatcgacgagtcccat
gtcaccctgccccaggtccgggccatgtacaacggggaccgggcccgcaagaccaccttg
gtggactacggcttccgcctcccctgcgcgtttgacaaccggccgctgaaatttgaggaa
ttcgagcagcgggtcaaccaggtggtgtacgtctcggccacgccgggggagtatgagcgc
acccgggcggggcagatcgtggagcaggtcatccgccccaccggactgctggacccccgc
atcgacgtgcggcccgtggagggccagatcgacgatctgatcggcgagatcaacgaccgg
acggcccggaaggagcgggtgctggtcaccaccctcaccaaaaagatggcggaggacctg
accgcctatctgaaaaacgccggcatcaaggtgcagtatatgcaccacgatatcgacacc
atcgagcggcaggagatcatccgggacctgcggctggggacctacgacgtgctggtgggc
atcaacctcctgcgggagggcctggacctgccggaggtgagcctggtggccattctggac
gcggacaaggagggcttcctccgcagcgagacctccctcatccagaccatcgggcgggcc
gcccggaacgccgacggccttgtggtcatgtacgccgacaagatgactccctccatgatg
gcggccatcggcgagaccgagcggcggcggaagaagcaggacgcctataacagggcccgc
ggcatcgtgcccaggaccatcatcaaatccgttcgggacgtcatcgagctctccgccgaa
gaggaggagaccgagcagctcatgcgccgcaagaccaagctctccaaaaaggagcgggac
gccgccgtggaaaagctggaaaaggagatgcgggaggccagcaagcggctggagttcgag
tacgccgccgtcctccgcgaccgcatcattgagctgaggggtcagtag
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