Intrasporangium calvum: Intca_0004
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Entry
Intca_0004 CDS
T01385
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
ica
Intrasporangium calvum
Pathway
ica03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ica00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Intca_0004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ica03400
]
Intca_0004
DNA repair and recombination proteins [BR:
ica03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Intca_0004
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ADU46566
UniProt:
E6SDW3
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All DBs
Position
5015..6289
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AA seq
424 aa
AA seq
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MHVRHLTLKDFRSYPGAEIAFSPGVTTLIGLNGQGKTNLVEAIGYLATLGSHRVAADQPL
VRFGASQAIVRGAVMSGGHETMIELEITPGRANRARLGRAPVSRPRDVLGTLRTVLFAPE
DLALVKGDPSERRRFLDDLLVQRQPRWAGVRADYDKIVKQRNALLKSAAPVLRPGRRGSG
GGGRAAARSRPGDPPVDEARESALHTLDVWNEHLATVGSQLLYARLRLLRDLRPDLSASY
DAVSASEAGATAQYKSSLHEEAAARLAAGEVPEIPELRQSLLDSLAAVRGAEIERGVGLV
GPHRDDVVLTLGNLPAKGYASHGESWSFALGLKLAAYRLLARDLGDDPVLVLDDVFAELD
SGRRERLAELIGDCEQVIITAAVGADVPVQLRERGHTYEVELGQIHALPTPTPAGPAEED
GSDA
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
gtgcacgtccgacacctgaccctcaaggacttccgcagctatccgggggccgagatcgcg
ttctcccccggggtgacgacgctcatcgggctgaacggacagggcaagaccaacctcgtg
gaggcgatcggctacctcgccacgctcggctcgcaccgggtcgcggccgaccagcccctc
gtccgcttcggtgcgagccaggccatcgtgcgtggcgccgtcatgagcggcggtcacgag
acgatgatcgagctcgagatcacgcccggccgggcgaaccgggcccggctcggacgggca
cccgtgtcacgcccccgggacgtgctcggcaccctccggaccgtcctcttcgccccggag
gacctcgccctcgtcaagggtgacccctctgagcggcgccggttcctcgacgacctgctc
gtccagcggcagccgcgctgggccggggtgcgtgcggactacgacaagatcgtcaagcag
cgcaacgccctgctcaagtccgcggcgcccgtgctgcgtcccgggcggcgcggttcgggt
ggagggggcagagcagcggcgcgctcccgacccggggacccgccggtcgacgaggcccgg
gagtcggcactgcacaccctggacgtgtggaacgagcacctggccacggtcgggtcgcag
ctgctctacgcccgcctcaggctcctccgtgacctgaggcccgacctcagcgcgagctac
gacgccgtgtcggcgagcgaggccggggcgacggcccagtacaagagctcgctgcacgag
gaggcggccgcaaggttggcggcaggggaggtgccggagattcccgagctgcgacagtcc
ctgctcgacagcctcgcggccgtccggggcgccgagatcgaacggggtgtcgggctggtc
ggcccgcaccgcgacgacgtcgtgctgacgttgggcaacctgccggcgaaggggtatgcg
agccacggcgagtcgtggagcttcgcgctcgggctcaagctcgccgcctatcggctgctg
gctcgcgacctcggggacgaccccgtcctcgtgctcgatgacgtcttcgccgagctggac
tccgggcgccgggagcggctggccgagctgatcggcgactgcgaacaggtcatcatcacg
gcggccgtcggggcggacgtgccggtgcagctgcgggaacgcgggcacacctatgaggtc
gagctggggcagatccacgcgctgccgaccccgacgccggcaggcccggcggaggaagat
ggctccgatgcctga
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