Intrasporangium calvum: Intca_0100
Help
Entry
Intca_0100 CDS
T01385
Name
(GenBank) extracellular solute-binding protein family 5
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ica
Intrasporangium calvum
Pathway
ica02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ica00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Intca_0100
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ica02000
]
Intca_0100
Transporters [BR:
ica02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Intca_0100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ADU46662
UniProt:
E6SFC4
LinkDB
All DBs
Position
108500..110347
Genome browser
AA seq
615 aa
AA seq
DB search
MRRPTVPRLGVGATLLTALATTLVLGACTGPAATPGPASPSATTATATGRGTPASTTTSA
ERAPLVVETVFDFTSLDPRVLVERSGLLVADAAYETLTTLDPEDPTTVLPGLAEWTMSPE
RNWLTLRLRPDATFSDGTRVTSDDVVFTLARARGLGGTAAQLLGPVGFTKVDDRTLTVIT
PGPNFALPAVLANPAFGILNADVVKQHGGAVGDGDTAGTWLSWNSAGSGPYVVAEADAGR
SITLQPNPHWSGPSPVFTEIVVRNAPPAQQVRDIESGAADVVLDLPPDHADAMKLRPTVS
SVAITSQTSPALAFLLLNDDQTVNRWTGNPDFVAAVRLGLDLEAVTRRAGPGAVPALGLV
PRGLPGAFEPPVPAATTPPTPTGRATGTAAPSPTSAPASVATSAPTSVPTSVPTSAATPT
PSGTAAPIPTATPTTPRAGDLAAARAALARSGYRGEPIRLSYASDRPLNGLDLRVVAAAI
RDQLRPVGIRVVLAPAPMVKALSDYEKGLDVMGLWAWTPEYAEPEAALAFAPGGHLAHRA
RWVRGVSSAMDALTAATRTSYGDERPGAFARWQLQMEQFGPFVPLFQPAAHLAHGERVTA
VPRTSIGSVDLAGIR
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgacccaccgtcccgaggttgggcgtcggcgccacgctgctcaccgccctcgcc
acgacgctcgtcctcggcgcgtgcaccgggccggccgcgaccccgggcccggcgagcccg
tcggccacgaccgccacggcgaccgggcggggcactcccgcctccacgacgacctccgcg
gagcgcgcccccctcgtcgtcgagacggtcttcgacttcacctcgctcgatccacgggtc
ctcgtcgaacgcagcggcctcctcgtcgccgacgcggcctacgagacgctgacgacgctc
gacccggaggaccccaccaccgtgctgccgggcctcgccgagtggaccatgtcacccgag
cgcaactggctcaccctgcgcctccgcccggacgccaccttctcggacggcacgcgcgtc
acctccgacgacgtcgtcttcaccctcgcccgggcccgtggcctcggcggcaccgcggcc
caactcctcggacccgtcggcttcaccaaggtcgacgaccgcaccctgaccgtcatcacg
ccgggcccgaacttcgcgctgcccgccgtcctcgccaacccggccttcggcatcctcaac
gccgacgtcgtcaaacagcacgggggcgcggtcggcgacggcgacaccgcaggcacctgg
ctcagctggaactccgccggctccggcccctacgtcgtcgccgaggctgacgccggccgc
agcatcaccctccagcccaacccccactggtccggcccgtctccggtgttcaccgagatc
gtcgtccgcaacgcccccccggcccagcaggtccgcgacatcgagtccggcgcggccgac
gtcgtgctcgacctgccccccgaccacgccgacgcgatgaagctccgacccacggtctcg
agcgtcgccatcacctcacagacctcacccgccctcgccttcctcctcctcaacgacgac
cagaccgtcaaccggtggaccggcaaccccgacttcgtcgccgcggtgcgcctcgggctc
gacctcgaggccgtcacgcgccgcgccgggccgggcgccgtccccgcgctcgggctggtg
ccccgcggcctgccgggcgccttcgagccacccgtcccggccgcgacgacgccgcccacc
ccgacgggaagagcgaccgggacggccgcgccttcgcccacctccgcacccgcgtccgta
gccacctcggcaccgacctcagtgccgacctcagtgccgacctcagcggccacgcccacg
ccgagcgggaccgccgcgcccattccgaccgcgacgccgaccacgccccgggccggggac
ctcgccgcggcaagggcagcgctggcccgctccggctaccgtggggagccgatccggctc
agctacgcgagcgaccgcccgctcaacggcctcgacctccgcgtcgtcgccgcggcgatc
cgcgaccagctcaggcccgtcgggatccgcgtcgtcctcgctcccgccccgatggtcaag
gccctctccgactacgagaagggcctcgacgtgatgggcctctgggcctggacccccgag
tacgccgagcccgaggcggcgctcgccttcgctccgggcggccatctcgctcaccgcgcc
cgctgggtccgcggcgtgagctcggcgatggacgccctgacggcagcgacccggacctcc
tacggcgacgagcgccccggggccttcgcgcgctggcagctccagatggagcagttcggt
ccgttcgtcccgctcttccagcccgccgctcacctcgcccacggcgaacgagtcaccgcc
gtgccacgcacgtcgatcggctccgtcgacctcgccgggatccgctag
DBGET
integrated database retrieval system
