Intrasporangium calvum: Intca_0242
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Entry
Intca_0242 CDS
T01385
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ica
Intrasporangium calvum
Brite
KEGG Orthology (KO) [BR:
ica00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ica03400
]
Intca_0242
DNA repair and recombination proteins [BR:
ica03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Intca_0242
Archaeal homologous recombinant proteins
Intca_0242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
ADU46799
UniProt:
E6S6R3
LinkDB
All DBs
Position
complement(262586..263782)
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AA seq
398 aa
AA seq
DB search
MRMLHTSDWHLGRTLHGVSLHEAQAAVLERICELVEDPPDGVPVDAVIVAGDVYDRGVPP
VESVQLFEWTLSRLSQVTTVVVTSGNHDSAIRLGYGAGLFRDTIRMITDLSMVDLPVLLD
GSDGVRAAIYGIPYLDVDHARAALARGGELLPRSHQAVVGAACDRIREDLRARTGVRSVV
VAHAFVAGAEPSDSERSIAVGGVDRVAGTVFAGLDYAALGHLHGPQSPECAEGSVVRYSG
SPLRYSFSEQDHAKCVLLVDLPAAGPVVVTPLPITQPRPMATLRGMLDDLLADPAHAMHE
DAWLRVTLTDRVRPDSLMDRLKSRFPHVLQVFHEPDGRIERGVRGTTAVSERDPRELGSD
FISYVTKTEASTGEIGCFVAGYEAAVKAQALAEAQEVA
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgcggatgctccacacgtcggactggcacctcgggcgcaccctccacggggtgagcctc
cacgaggcgcaggccgctgtgctcgagcggatctgcgagctcgtcgaggacccgcccgac
ggcgtgccggtcgacgcggtcatcgtggccggcgacgtctacgaccgcggggtgccgccg
gtcgagtcggtccagctcttcgagtggaccctgtcgcgcctgtcccaggtcaccaccgtc
gtcgtcacctcgggcaaccacgactcggcgatccggctcggctacggcgcggggctgttc
cgcgacaccatccggatgatcaccgacctctcgatggtcgacctgcccgtgctcctcgac
gggtccgacggggtgcgggcggcgatctacgggatcccctacctcgacgtcgaccacgcc
cgcgcggcgctcgcccgcggcggtgagctcctcccccggtcgcaccaggcggtcgtcggc
gcggcctgcgaccggatccgcgaggacctcagggcccgcaccggggtgcgctctgtcgtc
gtcgcgcatgccttcgtcgccggtgccgagccgagcgactccgagcgttcgatcgccgtc
ggtggcgtcgaccgcgtcgcgggcaccgtcttcgcggggctggactacgcggccctcggc
cacctgcacggcccccagtcgcccgagtgcgccgaggggtcggtggtccgctactcggga
tcgccgctgcgctactcgttctccgagcaggaccacgccaagtgcgtccttctcgtcgac
ctgcccgccgccgggcccgtcgtcgtgaccccgctcccgatcacccagcctcgcccgatg
gccaccctccgcgggatgctcgacgacctgctcgccgaccccgcgcacgcgatgcacgag
gacgcatggctgcgggtgaccctgacggaccgggtccggcccgactccctgatggaccgg
ctcaagtcccggttcccgcacgtcctccaggtcttccacgagccggacgggcggatcgag
cgcggcgtgcgcgggacgaccgccgtcagcgagcgcgacccgcgcgagctcgggtccgac
ttcatctcctacgtgacgaagaccgaggcgagcaccggcgagatcggctgcttcgtcgcc
ggctacgaggcggccgtcaaggcccaggcgctcgccgaggcccaggaggtggcctga
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