Intrasporangium calvum: Intca_0440
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Entry
Intca_0440 CDS
T01385
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ica
Intrasporangium calvum
Brite
KEGG Orthology (KO) [BR:
ica00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ica03032
]
Intca_0440
03400 DNA repair and recombination proteins [BR:
ica03400
]
Intca_0440
Enzymes [BR:
ica01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Intca_0440
DNA replication proteins [BR:
ica03032
]
Prokaryotic type
DNA Topoisomerases
Intca_0440
DNA repair and recombination proteins [BR:
ica03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Intca_0440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Ribosomal_S13_N
Motif
Other DBs
NCBI-ProteinID:
ADU46988
UniProt:
E6S8L9
LinkDB
All DBs
Position
479306..480343
Genome browser
AA seq
345 aa
AA seq
DB search
MRLRRSDPGKPGLRRVRRGKGFVVVDTEGRRVDADTMARVKALVIPPAWEDVWVCPWPNG
HIQAVGTDAAGRRQYLYHPAWHETRDRVKHERVVTLARRLPEARAEISRRLRRPGLGRER
VGAVALRLLDAGLFRTGGEEYETENGSHGVATLRKDHVSVRGDVVSFCFPAKSGVEREAE
VRDPALAKAVASLKRSRGPSERLLQYRTEGGAWCELTSTEINRDFKELVGDDYTVKDLRT
WAGTVLAAAAFAERADHGPPASERVRKKVEREVMTLVSEHLGNTPAVARRSYVDSRVPDE
YAAGRTIARALARASAADRRRLRRGDLAEVTDRAALERALVRLLS
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgaggaggagtgatccgggcaagcccggactgaggcgggtgcgccgcggcaag
ggtttcgtcgtcgtcgacactgagggacgccgcgtcgacgcggacacgatggctcgggtc
aaggcgctggtcatcccgcccgcgtgggaggacgtctgggtgtgcccgtggcccaacggt
cacatccaggccgtggggaccgacgcagccgggcggaggcagtacctctaccacccggct
tggcacgagacgcgggaccgggtcaagcacgagcgtgtcgtcacgttggcgcgacgcctc
ccggaggcgcgggccgagatcagccggcggttgcggcgacccgggctggggagggagcgg
gtcggcgccgtcgcgctccgcctcctcgacgcggggctcttccggaccgggggcgaggag
tacgagaccgagaacggcagccacggcgtcgccacgctgcgcaaggaccatgtcagcgtc
cggggggacgtcgtgtcgttctgcttccccgcgaagtccggggtcgagcgggaggccgag
gtccgcgacccggcgctcgccaaggccgtcgcgtccctcaagcgcagccgtgggccgagc
gagcggctgctccagtaccggaccgagggcggcgcgtggtgcgagctgacctcgacggag
atcaacagggacttcaaggagctggtcggtgacgactacaccgtcaaggacctccgcacg
tgggcgggcacggtgctcgcggctgcggccttcgccgagcgggccgaccacggtccgccg
gcgtccgagcgggtccgcaagaaggtcgagcgcgaggtgatgacgttggtgtccgagcac
ctcggcaacacgcccgccgtcgcacgccggtcctacgtcgacagcagagtccccgatgag
tatgccgctgggcgcacgatcgctcgggcgctcgctcgggcctcggctgcagatcgcaga
cggttgcgtcgtggagacctcgcggaggtcaccgaccgggccgccctggagcgggcgctc
gtgcgcctgctgtcctga
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