Intrasporangium calvum: Intca_0537
Help
Entry
Intca_0537 CDS
T01385
Name
(GenBank) ABC transporter related protein
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
ica
Intrasporangium calvum
Pathway
ica02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ica00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Intca_0537
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ica02000
]
Intca_0537
Transporters [BR:
ica02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Intca_0537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_16
SMC_N
AAA_22
AAA_30
RsgA_GTPase
AAA_23
TsaE
DUF3100
ABC_membrane_2
ABC_ATPase
EMC3_TMCO1
AAA
AAA_29
nSTAND3
MMR_HSR1
DUF87
DO-GTPase2
NTPase_1
cobW
NACHT
NB-ARC
AAA_7
AAA_19
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
ADU47082
UniProt:
E6S9A6
LinkDB
All DBs
Position
579879..581906
Genome browser
AA seq
675 aa
AA seq
DB search
MSEGVKTAEEKAAEARRGPARRGGPPHMMMGQPGEKSLNFGPSAKRLLGLLRPERGKVVG
VVTLVVVSVFLSAIGPKILGRATDLIFGGLLGRQLGQNVPAGATTEQVVAGLRARGEENL
ADMLQRAGVVIGQGIDFGAVADVLLLVTGLYVASSLLLWVQGWILQGVLARTMYRLRQDV
EAKLNRLPLPYFDKQPRGEILSRVTNDIDNVSMSLQQTLSQLLNSLLTVVAVLVMMFWIS
WVLALIALVTIPISIVVTGLIAKRSQKLFVQQWRNTGELNGIIEETYTGHGLVKVYGRQQ
ETEAHFRTKNDELFGAAFGAQFVSGIIMPVMMFIGNLNYVVVAVVGGLKVASGSMSLGDV
QAFIQYSRQFTQPLTQVASMANLLQSGVASAERVFEVLDADEQEAEVAVPDVIDDPRGEV
AFEGVSFAYTPDQPLIEDLDLVVRPGQTVAIVGPTGAGKTTLVNLIMRFYELDGGRITLD
GVDIRDLTRHGLRSRIGMVLQDTWLFAGTIRENIAYGRPGASDEEVLEAARATYVDRFVH
SLPDGYDTVLDDEASNISAGEKQLVTIARAFLSDPALLILDEATSSVDTRTELLVQQAMR
ALRSDRTSFVIAHRLSTIRDADLILVMEHGRIVEQGSHAELLAADGSYARLYAAQFAGAA
ADVDDVAEVAGPPVG
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagggagtcaagaccgccgaggagaaggccgccgaggcgcggcgcggcccggcc
cgccggggcgggccaccacacatgatgatggggcagccgggggagaagtcgctcaacttc
gggccctccgcgaagcgcctcctcggcctgctccgacccgagcgcggcaaggtcgtcggc
gtcgtgacgctcgtcgtcgtcagcgtgttcctcagcgcgatcgggccgaagatcctcggc
cgcgccaccgacctcatcttcggtgggctgctcggtcgccagctcggccagaacgtcccc
gcgggggcgacgaccgagcaggtcgtcgcgggcctgcgcgcccgcggcgaggagaacctc
gccgacatgctccagcgggccggtgtcgtcatcggccagggcatcgacttcggtgccgtc
gccgacgtgctgctcctcgtgacggggctctacgtcgcctcgtcgctgctcctgtgggtc
cagggctggatcctccagggcgtgctcgcccgcacgatgtaccggctgcggcaggacgtc
gaggccaagctcaaccggctgccgctgccctacttcgacaagcagccgcgcggcgagatc
ctctcccgggtcaccaacgacatcgacaacgtcagcatgtcgctgcagcagacgctgtcg
cagctgctcaactcgctcctgaccgtcgtcgcggttctcgtgatgatgttctggatctct
tgggtcctcgccctcatcgccctcgtgacgatccccatctccatcgtcgtcaccggcctc
atcgcgaagcggtcgcagaagctcttcgtccagcagtggcgcaacaccggcgagctgaac
ggcatcatcgaggagacctacaccggtcacggcctcgtcaaggtctacgggcggcagcag
gagaccgaggcgcacttccgcacgaagaacgacgagctgttcggcgccgcgttcggggcc
cagttcgtcagcggcatcatcatgcccgtcatgatgttcatcgggaacctcaactacgtc
gtcgtcgccgtcgtcggggggctcaaggtggcctccggctcgatgtcgctcggtgacgtc
caggccttcatccagtactcgcgccagttcacccagccgctgacccaggtggcctccatg
gcgaacctgctccagtccggggtcgcctccgccgagcgggtcttcgaggtcctcgacgcc
gacgagcaggaggccgaggtcgccgtcccggacgtcatcgacgacccgcgcggcgaggtc
gccttcgagggcgtgtccttcgcgtacacgccggaccagccgctcatcgaggacctcgac
ctcgtcgtccggccgggacagaccgtcgccatcgtcgggcccaccggcgcgggcaagacg
acgctggtcaacctcatcatgcggttctacgagctcgatggcggtcggatcaccctggac
ggcgtcgacatccgcgacctgacccggcacgggctgcgctcgcggatcggcatggtgctg
caggacacgtggctcttcgccgggacgatccgcgagaacatcgcgtacggccggccgggc
gcctccgacgaggaggtcctcgaggcggcgcgcgcgacctacgtcgaccggttcgtccac
tcgctgcccgacggctacgacaccgtcctcgacgacgaggcctcgaacatctcggccggc
gagaagcagctggtcaccatcgcgcgggccttcctctccgacccggcgctgctcatcctc
gacgaggcgacgagctcggtggacacgcggaccgagctgctcgtccagcaggccatgcgg
gcgctgcggtccgaccggacgagcttcgtcatcgcccaccggctctcgacgatccgggac
gccgacctcatcctcgtcatggagcacggtcgcatcgtggagcagggatcccacgccgag
ctgctcgccgccgacgggtcctacgccaggctgtatgccgctcagttcgcgggtgccgcg
gctgacgtcgacgacgtggctgaggtcgccggccccccggtcggctga
DBGET
integrated database retrieval system
