Intrasporangium calvum: Intca_0553
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Entry
Intca_0553 CDS
T01385
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ica
Intrasporangium calvum
Brite
KEGG Orthology (KO) [BR:
ica00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ica03032
]
Intca_0553
03400 DNA repair and recombination proteins [BR:
ica03400
]
Intca_0553
Enzymes [BR:
ica01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Intca_0553
DNA replication proteins [BR:
ica03032
]
Prokaryotic type
DNA Topoisomerases
Intca_0553
DNA repair and recombination proteins [BR:
ica03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Intca_0553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Mur_ligase_C
Toprim_2
MacB_PCD
Motif
Other DBs
NCBI-ProteinID:
ADU47098
UniProt:
E6S9C2
LinkDB
All DBs
Position
601975..604767
Genome browser
AA seq
930 aa
AA seq
DB search
MAAGKGRKLVIVESPGKVKSIASYLGGDYEVEASIGHIRDLPNPSELPAEMKKGPFGKFA
VDVDHGFEPYYVVDADKRKKVAELKRKLKDASELYLATDEDREGEAIAWHLLEALKPRVP
VKRMVFHEITREAIQRAVNDTREIDQDLVDAQETRRILDRLYGYEVSPVLWRKVRQGLSA
GRVQSVATRMVVERERERMAFVRASYWDVEGDFTPDGATQQFTARLSGVDGARVATGRDF
ADDGRLTGRNVVHVDEALARRIAEACLSVGQGATRVTDVQEKPYTRRPSAPFTTSTLQQE
ASRKLRMSSKNSMRVAQRLYEGGFITYMRTDSTTLSDAALTAARSQARDLYGAEYVPDAP
RRYEKKVKNAQEAHEAIRPAGDRFRTPAMVAGQLRGEDYALYELIWKRTVASQMADARGS
TATVKLSVDTAVESARQVEFSASGTVITFKGFLAAYEEGRDDEALARADAAAEERRLPRL
SSGVALQVVRAEADGHETAPPARYTEATLVKAMEEKGIGRPSTYASTIGTIQDRGYVYSK
GQALVPTWLAFAVTRLLEEHFSELVDYEFTASMEEDLDRIAGGELARVDWLKRFYFGDEA
STAEGLKELVDDLGEIDAREISTIPLGDGMVVRVGRYGPYVEETAPHGVDLETGELAAGT
DAAEVPTTPRRATINDDIPPDEMTPARARELLEAAADDGKVLGRDPETGREIIARAGRYG
PYVTEVLPEPEPELTASGKPKKVAKAKPRTASLFKDMDLGTIDLETALQLLSLPRVVGTD
ADGVEITAQNGRYGPYLKKGTDSRSLQSEQQLFDITLDQALAIYAQPKQRGRGAATAPLK
ELGEDPVSGKPVVVKDGRFGAYVTDGETNATLRKDDDPATITPERGFELLAEKRAKGPTT
RKRATKKTAKRATKKAPAKRATKKATTKKA
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggccgcaggaaagggccgcaagctcgtcatcgtcgagtccccgggcaaggtgaagtcg
atcgcctcctatctcggtggggactacgaggtcgaggcgtcgatcgggcacatcagggac
ctgcccaacccctccgagctcccggccgagatgaagaagggccccttcggcaagttcgcc
gtcgacgtcgaccacggcttcgagccgtactacgtcgtcgacgcggacaagcgcaagaag
gtcgccgagctcaagcggaagctcaaggacgcgagcgagctctacctcgcaacggatgag
gaccgcgagggagaggccatcgcctggcacctgctcgaggcgctcaagccgcgggtcccc
gtcaagcgcatggtcttccacgagatcacccgagaggcgatccagcgcgccgtcaacgac
acccgcgagatcgaccaggacctcgtcgacgcgcaggagacccggcgcatcctcgaccgg
ctctacggctacgaggtcagcccggtgctctggcgcaaggtgcgtcaggggctctcggcg
ggccgggtccagtccgtcgcgacccggatggtcgtcgagcgcgagcgcgagcggatggcc
ttcgtccgggcgtcctactgggatgtcgagggcgacttcaccccggacggcgcgacgcag
cagttcaccgcccggctctccggggtggacggggcgcgggtggcgaccgggcgcgacttc
gccgacgacgggcgcctgacgggccgcaacgtcgtccacgtcgacgaggcgctcgcccgg
cggatcgccgaggcctgcctctccgtcggccagggcgccacccgcgtcaccgacgtccag
gagaagccctacacgcgtcgcccctccgcaccattcacgacctcgacgctccagcaggag
gcgtcccgcaagctgcggatgagctcgaagaactcgatgcgcgtcgcgcagcgcctctac
gagggcggcttcatcacctacatgcggaccgactcgacgacgctgtccgacgcggcgctc
accgcggcccgcagccaggctcgggacctctacggcgccgagtacgtccccgacgcgccc
cgccgctacgagaagaaggtcaagaacgcgcaggaggcgcacgaggcgatccggccggcc
ggggaccgcttccgcacccccgcgatggtcgccgggcagctccgcggggaggactacgcc
ctctacgagctgatctggaagcgcaccgtcgcctcgcagatggccgatgcccgcggctcg
accgccacggtcaagctctccgtcgacacggccgtcgagtcggcccggcaggtcgagttc
agcgcgagcggcacggtgatcaccttcaaggggttcctcgcggcctacgaggaggggcgc
gatgacgaggccctggcccgcgccgacgccgccgccgaggagcgccggctgcccaggctg
tcgagcggggtcgccctccaggtcgtccgcgccgaggccgacgggcacgagaccgccccg
cccgcgcgctacaccgaggccaccctggtcaaggcgatggaggagaagggcatcggccgt
ccctccacctacgcctcgacgatcggcacgatccaggaccgcggctacgtctacagcaag
ggtcaggccctcgtcccgacctggctcgccttcgccgtgacccgcctgctcgaggagcac
ttcagcgagctcgtcgactacgagttcaccgcctccatggaggaggacctcgaccggatc
gccggcggagagctggcccgggtcgactggctcaagcggttctacttcggcgacgaggcc
tcgaccgccgagggcctcaaggagctcgtcgacgacctcggtgagatcgacgcccgcgag
atcagcacgatcccgctcggcgacgggatggtggtgcgggtcggccgctacggcccctac
gtcgaggagaccgccccgcatggcgtcgacctcgagaccggtgagctggccgccggaacc
gacgccgccgaggtcccgaccaccccgcggcgggcgaccatcaacgacgacatccccccg
gacgagatgaccccggccagggcgcgcgagctgctcgaggccgccgcggacgacggcaag
gtgctcggccgcgacccggagaccggccgagagatcatcgccagggccggacgctacggc
ccctacgtcaccgaggtgctccccgagcccgagccggagctgacggcgagcggcaagccg
aagaaggtcgccaaggccaagccgcggaccgcgtcgctcttcaaggacatggacctcggg
acgatcgacctcgagaccgcgctccagctgctcagcctgccgcgggtcgtcggcaccgac
gcggacggcgtcgagatcaccgcgcagaacggccgctacggcccctacctcaagaagggc
accgactcgcggtcgctccagtccgagcagcagctcttcgacatcacgctcgaccaggcc
ctggccatctacgcgcagcccaagcagcgcgggcgcggcgcggcgaccgccccgctcaag
gagctcggcgaggacccggtgagcggcaagcccgtcgtcgtcaaggacgggcggttcggc
gcctacgtcaccgacggtgagaccaacgcgaccctccgcaaggacgacgacccggcgacc
atcacccctgagcgcggcttcgagctgctcgccgagaagcgcgccaagggtccgacgacc
cgcaagcgcgcgacgaagaagaccgcgaagagggccaccaagaaggcgcccgcgaagcgg
gccaccaagaaggccaccacgaagaaggcctga
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