Intrasporangium calvum: Intca_0571
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Entry
Intca_0571 CDS
T01385
Name
(GenBank) DNA polymerase III, delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
ica
Intrasporangium calvum
Pathway
ica03030
DNA replication
ica03430
Mismatch repair
ica03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ica00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Intca_0571
03430 Mismatch repair
Intca_0571
03440 Homologous recombination
Intca_0571
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ica03032
]
Intca_0571
03400 DNA repair and recombination proteins [BR:
ica03400
]
Intca_0571
Enzymes [BR:
ica01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Intca_0571
DNA replication proteins [BR:
ica03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Intca_0571
DNA repair and recombination proteins [BR:
ica03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Intca_0571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_16
DNApol3-delta_C
AAA_22
AAA_5
AAA_30
Mg_chelatase
RuvB_N
KTI12
AAA_18
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ADU47116
UniProt:
E6S9E0
LinkDB
All DBs
Position
complement(625911..627062)
Genome browser
AA seq
383 aa
AA seq
DB search
MTVWRDLVGQEPTVETLSRAVRAEASMTHAWLFTGPPGSGRSTAARAFAAALQCPEGGCG
ECRECRTALDGSHADVKVVATEGLSIQVRDTRDLVQESALRPSVGRWRVIIIEDADRLTE
RAADALLKALEEPTPRTVWMLCAPSLEDVIITIRSRSRHVRLRTPPVHAVAELLERRDGV
DAPMALHAARAAQSHIGLARRLARDEGARIRRRDVIAMATKIVGVGDAVDAAADLAQIAD
EESTASTAERDAAERSRLLETLGADPTARTQPPHIRSQLVALEKEQRTRATRHARDMVDR
SLVDLMSVYRDALVLRLGSNVDLINPDAIDRVRSLGAVFSAEQLLRCLDAITEARERINA
NVPPLLALEAMALQLRVPRDLNL
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgactgtctggcgcgacctcgtcggccaggagcccaccgtcgagacgctgtcccgcgcc
gtccgggccgaggcgtccatgacacatgcctggctcttcaccggcccgcccggctcgggt
cgctccacggcggcccgggccttcgccgccgcgctgcagtgtcccgagggcggctgcggg
gagtgccgtgagtgccggaccgccctcgacgggtcgcacgccgacgtcaaggtcgtcgcg
accgaggggctgtcgatccaggtccgcgacacgcgggacctcgtccaggagtcggcgctg
cgcccgtcggtgggccggtggcgggtgatcatcatcgaggacgcggaccggctcaccgag
cgcgccgcggacgccctgctcaaggcgctcgaggagccgacgccgcgcaccgtgtggatg
ctgtgcgccccgagcctcgaggacgtcatcatcacgatccgctcccgttcgcggcacgtc
cggctccggacacccccggtccacgccgtggccgagctgctcgagcggcgcgacggggtg
gacgcgccgatggccctccacgccgcccgcgccgcgcagtcccacatcggcctggcccgc
cggctcgcccgggacgagggtgcgcggatccgccgccgggacgtcatcgcgatggcgacg
aagatcgtcggcgtcggtgatgcggtcgacgcggccgccgacctcgcccagatcgctgac
gaggagtccaccgcgagcacggctgagcgcgacgcggccgagcggtcccggctgctcgag
acgctgggcgccgacccgacggcgcgcacccagccgccgcacatccggtcccagctggtt
gcgctcgagaaggagcagaggacgcgggccacccggcacgcgcgcgacatggtcgaccgg
tcgctcgtcgacctgatgtcggtctaccgggacgccctcgtcctgcgtctcggctcgaac
gtcgacctcatcaacccggacgccatcgaccgggtccgcagcttgggggccgtgttctcg
gcagagcagctgcttcgatgcctcgacgcgatcaccgaggcgcgcgagcggatcaacgcg
aacgtcccgccgctcctcgccctcgaggcgatggccctccagctccgggtgccgcgcgac
ctcaacctgtga
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