Intrasporangium calvum: Intca_0733
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Entry
Intca_0733 CDS
T01385
Name
(GenBank) helicase domain protein
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
ica
Intrasporangium calvum
Pathway
ica03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ica00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Intca_0733
09124 Replication and repair
03420 Nucleotide excision repair
Intca_0733
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ica03021
]
Intca_0733
03400 DNA repair and recombination proteins [BR:
ica03400
]
Intca_0733
Enzymes [BR:
ica01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Intca_0733
Transcription machinery [BR:
ica03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Intca_0733
DNA repair and recombination proteins [BR:
ica03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Intca_0733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
ADU47277
UniProt:
E6SB16
LinkDB
All DBs
Position
complement(801197..802849)
Genome browser
AA seq
550 aa
AA seq
DB search
MNDGPLIVQSDKTLLLEVDHPRAEEARRAIAPFAELERAPEHVHTYRVTPLGLWNARAAG
HDAEQVVDALITFSRYAVPHALLVDIADTMDRYGRLTLEKEGFADSAEGTRLVLRTTDRP
VLEEVLRHKKIQPLLGERIDDLAVVVHPSERGHLKQELLKVGWPAEDLAGYVDGEAHPID
LRQDDWHLRPYQQQAVDGFWHGGSGVVVLPCGAGKTLVGAGAMAAAKATTLILVTNTVSA
RQWKDELIRRTSLTEEEIGEYSGARKEIRPVTIATYQVLTTRRKGAYTHLDLLDARDWGL
VVYDEVHLLPAPIFRMTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKDIEA
QGYIAPADCVEVRVTLPDSLRLAYATAEPEDRYRLASCADAKLAVVEQLAQRHTAEPTLI
IGQYLDQLHEIAERLDADVITGETTVRERQRLYDAFRRGEITRLVVSKVANFSIDLPEAS
VAIQVSGTFGSRQEEAQRLGRVLRPKGDGRTAHFYTVVARDTVDADFAAHRQRFLAEQGY
SYRIVDATDL
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacggacccctgatcgtccagagcgacaagaccctgctcctcgaggtcgaccac
ccgcgcgccgaggaggcgcgccgggccatcgcgcccttcgccgagctcgagcgcgccccg
gagcacgtccacacctaccgggtcacgccgctcggcctgtggaacgcccgcgcagccggc
cacgacgcggagcaggtcgtcgacgcgctcatcaccttcagccgctacgccgtcccgcac
gcactcctcgtcgacatcgccgacaccatggatcgctacggccgcctcaccctcgagaag
gagggtttcgccgacagtgcggagggcacccgtctggtgctgcgcaccacggaccgtccc
gtcctcgaggaggtcctgcgccacaagaagatccagccgctgctcggtgagcgcatcgac
gacctcgcggtcgtcgtccacccgagcgagcgcggccacctcaagcaggagctgctcaag
gtcggctggccggccgaggacctcgccggctacgtcgacggcgaggcgcaccccatcgac
ctgaggcaggacgactggcacctccggccctaccagcagcaggcggtcgacggcttctgg
cacggcggatcgggcgtggtcgtcctcccctgcggcgccggcaagacgctcgtgggcgcc
ggcgcgatggccgcggcgaaggccaccaccctcatcctcgtcaccaacaccgtcagcgcc
cggcagtggaaggacgagctgatccgccgcacctcactgaccgaggaggagatcggcgag
tactccggcgcccgcaaggagatccgcccggtcaccatcgcgacctaccaggtgctgacg
actcggcggaagggcgcctacacgcacctcgacctgctcgatgcccgagactggggcctt
gtcgtctatgacgaggtgcacctgctcccggcgccgatcttccggatgaccgcggacctc
caggcccgtcgacggctcggcctcaccgccacgctcgtccgggaggacggccgcgagtca
gacgtcttcagcctcatcgggcccaagcgcttcgacgcaccgtggaaggacatcgaggcg
cagggctacatcgcgccggccgactgcgtcgaggtccgggtcaccctgcctgactcgctc
cgactcgcctacgcgaccgccgaaccggaggaccgctaccggctggcgagctgcgccgac
gcgaagctcgcggtcgtcgagcagctggcccagcggcatacggcggagccaaccctcatc
atcggccagtacctcgaccagctccacgagatcgccgagcggctcgacgccgacgtcatc
accggcgagacgacggtccgggaacgccagcggctctacgacgcgttccgccggggcgag
atcacccgcctcgtcgtctcgaaggtggccaacttctcgatcgacctgcccgaggcgagc
gtggcgatccaggtcagcgggacgttcggctcccgccaggaggaggcgcaacggctcggg
cgcgtgttgcgccccaagggcgacgggcggacggcgcacttctacaccgtggtcgcccgg
gacaccgtcgacgcggacttcgcggcccaccgccagcggttcctcgccgagcagggctat
tcctaccggatcgtcgacgccaccgacctctga
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integrated database retrieval system
