Intrasporangium calvum: Intca_1097
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Entry
Intca_1097 CDS
T01385
Name
(GenBank) transcriptional regulator, IclR family
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
ica
Intrasporangium calvum
Brite
KEGG Orthology (KO) [BR:
ica00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ica03000
]
Intca_1097
Transcription factors [BR:
ica03000
]
Prokaryotic type
Helix-turn-helix
IclR family
Intca_1097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HTH_24
MarR
TrmB
HTH_20
Dimerisation
Fe_dep_repress
HTH_AsnC-type
HTH_23
HTH_5
HTH_Crp_2
HTH_36
HTH_29
HTH_Tnp_ISL3
DUF4423
HTH_38
DUF5817_CT
DUF7342
DIP2311-like_C
HTH_10
Rrf2
TetR_N
GAF
HTH_6
HTH_17
FtsK_gamma
TFIIE_alpha
HTH_Tnp_4
Ribosomal_S25
Motif
Other DBs
NCBI-ProteinID:
ADU47618
UniProt:
E6SE05
LinkDB
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Position
complement(1213946..1214752)
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AA seq
268 aa
AA seq
DB search
MSIEAAWCSTTPRKPATVVDPQIPSGLKSVGSALDVLECFAVDGELGVSDIARRLGVAKS
TAHRLLQTLVSRGFVEQDATSGAYRLGIHLYELGQLALARNELRHAALPTLRQVARATNL
TVNFSVPEGADVVFIERIENLDGVRILGHFGRRLPSHCTSSGKVIAAFNPTVYRARLNAG
FPPRLRGTVRTAEEWETVVDQVRAKRYAESHGESFDGASSVAVPVVSHGRAVASLSVFGP
TDQVKPAVGQLVPLLTAAANRIVKNLGR
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcgaagccgcgtggtgctccacgaccccccgcaagccagcgacggtggtagac
ccgcagatcccgtccggactgaagtcagtgggttccgccctggacgtgctcgagtgcttc
gcggtcgacggtgagctcggcgtctccgacattgcccggcggctgggagtggccaagtcg
acggcgcaccggctgctccagaccctcgtgtcgcgcggcttcgtcgagcaggacgcgacg
tccggtgcctaccgcttggggatccacctctacgagctgggccagctcgccctggcccgc
aacgagctgcggcacgccgcgctgcccacgctgcgccaggtcgcccgggcgacgaatctg
acggtgaacttctccgttcccgagggcgccgacgtcgtcttcatcgagcggatcgagaac
ctcgacggtgtgcgcatcctcggccacttcgggcggcgacttccctcgcactgcacgagc
tccggcaaggtgatcgccgcgttcaacccgacggtctaccgggcccggctcaacgcgggg
ttcccacctcgactccggggcaccgtgcgcacggccgaggagtgggagaccgtcgtcgac
caggttcgggcgaagcggtacgccgagtcccacggcgagtccttcgacggggcctcctcc
gtcgcggtgcccgtggtgagccatgggcgggccgtcgcttccctgtccgtgttcgggccg
accgaccaggtcaagccggctgtcggccagctcgtcccgctcctgaccgccgcggcgaac
cggatcgtcaagaacctcggccgctga
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