Intrasporangium calvum: Intca_1566
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Entry
Intca_1566 CDS
T01385
Name
(GenBank) hemolysin A
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
ica
Intrasporangium calvum
Brite
KEGG Orthology (KO) [BR:
ica00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ica03009
]
Intca_1566
Enzymes [BR:
ica01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
Intca_1566
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
Intca_1566
Ribosome biogenesis [BR:
ica03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Intca_1566
23S rRNA modification factors
Intca_1566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_25
Methyltransf_23
Methyltransf_11
Methyltransf_12
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
ADU48079
UniProt:
E6S8U2
LinkDB
All DBs
Position
1769548..1770351
Genome browser
AA seq
267 aa
AA seq
DB search
MTRGRLDAALVARGLARSRAQAGELVRAGVVRVDDRVVDKPSHPVSELASIVLTRPADHW
VSRAAYKLLRALELWPVDVAGRRCLDVGASTGGFTQVLLEHGAARVTALDVGHGQLAPVV
ASDPRVLDLPGTNIRDVGSGTVDGPFDLVVCDVSFISLSVVLPVLRPLVADDGDLIVLVK
PQFEVGRERLARSGVVTSSGEHRRVLLAVHAAAGGVGLEVRGAARSPIRGGEGNVEFLLW
LVPRRPGTGGLNADDMLVSIDAQEEEP
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
gtgactcgaggtcgcctcgatgccgccctcgtcgcccgtgggctcgcccggtcgcgcgcg
caggctggtgagctcgtccgggcgggcgtcgtccgtgttgacgaccgggtggtcgacaaa
ccgagccacccggtctcggagctcgcctcgatcgtcctgacccggccggccgatcactgg
gtgagccgggcggcgtacaagctgctccgagctctggagctgtggccggtcgatgtcgct
ggtcggcggtgcctcgacgtcggcgccagtaccggcgggttcacccaggtcctgctggag
cacggggccgcgcgcgtcaccgcgctggatgtggggcatgggcagcttgccccggtggtc
gcgagcgacccccgggttctcgatctacccggaacgaacatccgcgatgtcgggtccggg
acggtggacgggcccttcgacctcgtggtctgcgacgtcagcttcatctccctcagcgtc
gtcctgccggtgctgcgacccctcgtggcggacgacggggacctcatcgtgctggtcaag
cctcagttcgaggtcggccgcgagcgcttggcccgcagcggggtggtcacctcgagcggc
gagcaccgacgggtgctgctggcggtccatgcggcggcggggggcgtcggactggaggtc
aggggcgcggcccgcagcccgatccgtggaggggagggcaacgtggagttcctgctgtgg
cttgtgccacgtcgccccgggaccggcggcctgaatgcggatgacatgctggtctcgatc
gacgcccaggaggaggaaccgtga
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integrated database retrieval system
