Intrasporangium calvum: Intca_1656
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Entry
Intca_1656 CDS
T01385
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ica
Intrasporangium calvum
Pathway
ica03030
DNA replication
ica03410
Base excision repair
ica03420
Nucleotide excision repair
ica03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ica00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Intca_1656
03410 Base excision repair
Intca_1656
03420 Nucleotide excision repair
Intca_1656
03440 Homologous recombination
Intca_1656
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ica03032
]
Intca_1656
03400 DNA repair and recombination proteins [BR:
ica03400
]
Intca_1656
Enzymes [BR:
ica01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Intca_1656
DNA replication proteins [BR:
ica03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Intca_1656
DNA repair and recombination proteins [BR:
ica03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Intca_1656
NER (nucleotide excision repair)
GGR (global genome repair) factors
Intca_1656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
ADU48169
UniProt:
E6S9H3
LinkDB
All DBs
Position
1871633..1874308
Genome browser
AA seq
891 aa
AA seq
DB search
MSRLLLLDGHSLAYRAFYALPAENFSTVTGQHTNAVYGFTSMLINMLRDEQPTHVVVAFD
KSRHTFRTEEYAEYKAGRARTPDEFAGQLPLVKEVLDALRIRYCELDGYEADDIIATIAS
EADTKGVEVLICSGDRDTFQLVSDHVTILYPVRGVSEVWRMGPAQIEEKYGVPPARYSDL
AAMVGESSDNLPGVPGVGPKTAAKWITQFGGLEGIVAGIDQIKGKAGEALRDHLDQVLRN
RRLNQLVKDAPVGCTIDDLERAQWSREEVHEVFDRLEFRVLRDRLFAEVEASAPEADEGF
DVEGRTLAAEDVPGWLGERVAGGERAGLSVTGTWARGTGDATALAIAAAGGAAAWVDLTA
LDPAGEAAVGAWLEDASRPKAMHDAKGPIEALAARGWILRGLTSDTQLAAYLVKPDQRTY
HLDDLVLRHLRRELSATTDTHGQGMLDFAGDADEKAALKEMVRATAVRDLAAVLDEQVAA
TGGTELLSDIELPLIHVLAKMERTGIAVDVDGLSTLEETFAAKVTQAQQDCWDAIGGDQI
NLGSPKQLQVVLFETLGMPKTKKTKTGYTTDADALAELHAKTEHPFLEALLRHRDAAKLR
VTVEGLQKSVSDDGRIHTTYLQTIAATGRLSSTEPNLQNVPIRTEEGRRIRELFVVGDGY
DALMSADYSQIEMRVMAHLSGDSGLIEAFRSGEDLHRFVGSQVFGVAPEDVTAAMRSKVK
AMSYGLAYGLSAYGLSKQLAISTEEAKGLMEGYFARFGGVRAYLDEVVAEARGTGFTATM
FGRRRYLPDLTSDNRQRREMAERMALNAPIQGSAADIMKVAMIGVDRTLTEAGARTRILL
QVHDELVLEVAADEQADVERIVREQMGHAAEMDVPLDVNIGVGRSWHDAAH
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgacttctcctcctcgatggacactcgcttgcctaccgagcgttctacgccctc
cctgccgagaacttctcgaccgtcaccggccaacacaccaacgcggtctacggcttcacg
tcgatgctcatcaacatgctgcgggacgagcagccgacgcacgtggtcgtcgccttcgac
aagtcgcgccacaccttccgcacggaggagtacgccgagtacaaggcgggtcgcgcccgc
acgccggacgagttcgccgggcagctgccgctcgtcaaggaggtgctcgacgccctccgg
atccgctactgcgagcttgacggctacgaggccgacgacatcatcgcaaccattgcgtcc
gaggccgacaccaagggtgtcgaggtgctgatctgctccggggaccgagacaccttccag
ctcgtcagcgaccacgtgacgatcctctacccggttcgtggggtgtcggaggtctggcga
atgggacccgcccagatcgaggagaagtacggcgtcccgccggcccgctacagcgacctc
gctgcgatggtgggggagtcctcggacaaccttccgggcgtgcccggagtcggccccaag
accgccgcgaagtggatcacccagttcggcggcctggagggaatcgtcgccggaatcgac
cagatcaagggcaaggccggtgaggcgttgcgcgaccacctcgaccaggtgctgcgcaac
cgccggctcaaccagctcgtcaaggacgcccccgtcgggtgcaccatcgacgacctcgag
cgggcccagtggtcgcgtgaggaggtccacgaggtgttcgaccgcctcgagttccgggtc
ctccgcgaccgtctcttcgccgaggtcgaggccagcgctcccgaggcggacgagggcttc
gacgtcgagggtaggaccctggccgccgaagacgtgccggggtggctgggcgagcgcgtg
gccggaggggagcgggccgggctgtccgtcacaggcacctgggcgcgaggcaccggggac
gcgaccgccctcgcgatcgccgcagccgggggcgcggcggcctgggtcgacctgaccgct
ctcgatccggccggtgaggctgcggtgggagcgtggctcgaggatgcctcgcgcccgaag
gcgatgcatgacgccaaggggcccatcgaggctctggcggcgcgcggctggatcctgcga
gggctgaccagcgacacccagctggccgcctacctcgtcaagcccgaccagcgcacctac
cacctcgacgacctcgtcctgcgacacctgaggcgtgagctgagcgccaccacggacacc
cacgggcagggcatgctcgacttcgccggggacgcggacgagaaggcggccctcaaggag
atggtgcgggccaccgcggtgcgtgacctcgccgcggtcctcgacgagcaggtggccgcg
accggagggaccgagctgctctccgacatcgagctgccgctcatccatgtgctcgcgaag
atggaacgcaccgggatcgccgtcgacgtcgacggactgtcgaccctcgaggagaccttt
gccgccaaggtgacgcaggctcagcaggactgctgggacgccatcggtggcgaccagatc
aacctcgggtcgccgaagcagctgcaggtcgtcctcttcgagaccctcgggatgccgaag
accaagaagaccaagaccggctacacgaccgacgccgacgcgctcgccgagctccacgcg
aagacggagcacccgtttctcgaggcactcctccgccaccgcgacgccgcgaagctgcgc
gtcacggtcgaggggctccagaagtcggtcagcgatgacggacggatccacacgacctac
ctccagacgatcgccgccacgggacggctctcgtccaccgagcccaacctgcagaacgtg
ccgatccgcacggaggaaggtcgccggatccgcgagctgttcgtcgtcggcgacgggtac
gacgcgctgatgtccgccgactactcgcagatcgagatgcgcgtcatggcacatctttcg
ggggacagcgggctcatcgaggccttccgctctggggaggacctgcaccgcttcgtgggg
tcgcaggtcttcggggtcgcacccgaggatgtcactgccgcgatgcgctcgaaggtcaag
gcgatgtcctacgggctcgcctacggcctgtccgcgtacgggctgtccaagcagctggcg
atcagcaccgaggaggccaagggcctcatggagggctacttcgccaggttcggaggggtc
cgcgcctacctcgatgaggtcgtcgccgaggcaagggggacgggcttcaccgcgaccatg
ttcgggcggcgccgctacctgcccgatctcacgtcggacaaccggcagcggcgcgagatg
gccgagcggatggccctcaacgccccgatccagggctcggctgccgacatcatgaaggtc
gcgatgatcggcgtcgaccggaccctgaccgaggctggagcacgcacgcgcatcctgctg
caggtgcacgacgagctcgtgctcgaggtggctgccgacgagcaggccgacgtggagcgg
atcgtgcgtgagcagatgggtcacgccgccgagatggacgtcccgctcgacgtcaacatc
ggtgtggggcgctcatggcacgacgcggcgcactga
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