Intrasporangium calvum: Intca_1912
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Entry
Intca_1912 CDS
T01385
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ica
Intrasporangium calvum
Brite
KEGG Orthology (KO) [BR:
ica00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ica03016
]
Intca_1912
Enzymes [BR:
ica01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Intca_1912
Transfer RNA biogenesis [BR:
ica03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Intca_1912
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
XPC-binding
Motif
Other DBs
NCBI-ProteinID:
ADU48423
UniProt:
E6SBR4
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All DBs
Position
2148579..2149835
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AA seq
418 aa
AA seq
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MSAEPSSPATPEPTRPLTPLTMPSDGVPEVVTDERALLRAAAAIAAGSGPIGVDAERASG
YRYGQRAYLVQVRRQGAGTVLLDPVAVPDLSPLDRAIGDAEWILHAATHDLVCLAEVGLQ
PRVLFDTELGGRLAGLPRVGLGAMVEHYLGLQLAKEHSAVDWSIRPLPEPWLRYAALDVE
VLVDLRHAVHADLERQGKAGWAAEEFQSLLQFTGPEPRVDPWRRTSGIHRIRARRGTAIV
RELWVWRDELARQRDVSPGRIVPDAAIAEIAIAHQRAERPPRTLTSSDPRLARSIRRHQE
ALIDVVGAALALPEEDLPPLALPSTGPPPPRTWADRDPVAAARLARARELLAGLSEELVI
PVENVLTPDLLRRYLWEGPAAPTTAAVAEELAAMGARTWQTRLAAPLIALACAEHPRA
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgccgagccgagctcgccggcgacgcccgagcccaccaggccgctgacgccactg
accatgccgagtgacggggtccctgaggtcgtcaccgacgagcgtgcgctgctccgtgcg
gccgcggccatcgccgcgggctccggcccgatcggggtggatgccgagcgagcctcgggt
taccgctacggccagcgcgcctacctggtccaggtccgccggcagggagcgggaaccgtc
ctcctcgacccggtcgccgtgccggacctcagcccgctcgaccgcgccatcggtgacgcc
gagtggatcctccacgccgccacccatgacctcgtgtgcctcgccgaggtcgggctgcag
ccccgggtcctcttcgacaccgagctggggggccggctcgccgggctgccccgcgtcggc
ctgggggccatggtcgagcactacctgggcctgcagctcgccaaggagcactccgccgtc
gactggtcgatccggccgctgcccgagccctggcttcgctatgcggctctcgacgtcgag
gtcctcgtcgacctgcggcacgcggtgcacgcggacctcgagcggcagggcaaggccggg
tgggccgcggaggagttccagtccctgctgcagttcaccggacccgagccgcgggtcgac
ccgtggcgacgcacctcggggatccaccgcatccgggcccgccgcggcacggccatcgtc
cgggagctctgggtctggcgggacgagctcgcccgacagcgcgatgtgtcacccgggcgg
atcgtgcccgacgccgccatcgccgagatcgccatcgcgcaccagcgcgcggagcgtcca
ccccggaccctcacctcgtcggaccctcgcctcgcccgctccatccgccgacaccaggag
gcgctgatcgacgtggtcggcgcggcgctcgcgctgccggaggaggacctgccgcccctg
gccctcccctcgaccggccctcccccgccgcgcacctgggccgatcgagaccctgtggcc
gccgcccgcctggcgcgggcccgggagctgctcgccggtctgtccgaagagctcgtcatc
ccggtcgagaacgtcctgacccccgacctgctccgtcgctacctctgggaagggccggcg
gccccgaccacggcagcggtcgccgaggaactggcggcgatgggcgctcgcacgtggcag
acgaggctggccgccccactgatcgccctggcctgcgccgagcacccccgcgcctga
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