Intrasporangium calvum: Intca_1949
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Entry
Intca_1949 CDS
T01385
Name
(GenBank) DNA topoisomerase IV subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ica
Intrasporangium calvum
Brite
KEGG Orthology (KO) [BR:
ica00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ica03032
]
Intca_1949
03400 DNA repair and recombination proteins [BR:
ica03400
]
Intca_1949
Enzymes [BR:
ica01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Intca_1949
DNA replication proteins [BR:
ica03032
]
Prokaryotic type
DNA Topoisomerases
Intca_1949
DNA repair and recombination proteins [BR:
ica03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Intca_1949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
ADU48460
UniProt:
E6SBV1
LinkDB
All DBs
Position
complement(2192822..2194954)
Genome browser
AA seq
710 aa
AA seq
DB search
MASASRPAPNGNGDYTARHLQVLEGLEAVRKRPGMYIGSTDQRGLMHCLWEIIDNAVDEA
LAGVCDHIDVILARDGSIEVRDNGRGIPVDMEPRTGLSGVELVFTKLHAGGKFGGTSYAA
TGGLHGVGASVVNALSARLDVEVDRDGRTYGMSFRRGEPGIFTDSGSGHSPDSPFEPYEK
RSAVPVIGKTKRGVTGSRVRFWPDPHIFLKGSVLDYDALVGRARQTSFLVPGLRLVIRDE
RRLPGTPAADGPVEEVFHHDGGITEFVEFLAPDPPVTDVWRLQGSGTFKETVPILDNEGH
MSPTELERECVVDVALRWGQGYDARMQSFVNIITTPKGGTHVAGFEQALLKVFRRQLEIN
GRRLKVGNDKPDKDDVLAGMTAVVTVRLAEPQFEGQTKEVLGTNAVRAIVARVVETELTA
RLTSTKRGDKAQAALLLEKVVSEMKSRISARLHKETQRRKNALESSTLPTKLRDCRTNDV
DRSELFIVEGDSAMGTAKEARNSEFQALLPIRGKILNVQKASVSDMLKNAECASIIQVIG
AGSGRSFDLAAARYGKVIIMTDADVDGAHIRTLLLTLFFRYMRPLVEAGRVYAAMPPLHR
IEVVNAGAKKNELIYTYNEIEMRRTVARLEKTGKKIKQPMQRYKGLGEMNADQLADTTMD
PRHRTLRRVTMRDFEAAEGTFELLMGNEVAPRKDFIIESAAEVDRERIDA
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
ttggcctccgcctcccgccccgcccccaacggcaacggtgactacaccgctcgccacctt
caggtcctcgagggactcgaagccgtgcgcaagcgccccggcatgtacatcggctcgacg
gaccagcgcggcctcatgcactgcctgtgggagatcatcgacaacgccgtcgacgaggcg
ctggccggcgtgtgcgaccacatcgacgtcatcctggcccgcgacggctccatcgaggtc
cgggacaacgggcgcgggatcccggtcgacatggagccccgcaccgggctctccggggtg
gagctcgtcttcaccaagctccacgccggcggcaagttcggcgggacctcctacgcggcc
accggcggcctccacggcgtcggcgcgtccgtcgtcaacgcactctcggcccgcctcgac
gtcgaggtggaccgagacggcaggacctacgggatgagcttccgccgcggcgagcccggc
atcttcaccgactcgggctccgggcactccccggactcgcccttcgagccgtacgagaag
cgcagcgcggtgccggtcatcggcaagacgaagcgcggcgtcaccggttcccgggtgcgg
ttctggcccgacccccacatcttcctcaaggggtcggtcctcgactacgacgccctcgtc
gggagggcccgccagacctcgttcctcgtccccggcctacgcctggtgatccgggacgag
cggcgcctccccggcacgccggcggctgacgggccggtcgaggaggtcttccaccacgac
ggtgggatcaccgagttcgtcgagttcctcgcccctgacccgccggtgaccgacgtgtgg
cgcctgcaggggtcggggacgttcaaggagacggtgccgatcctcgacaacgaggggcac
atgagcccgaccgagctggagcgcgagtgcgtcgtcgacgtcgcgctccgctgggggcag
ggctacgacgcgcggatgcagtcgttcgtcaacatcatcaccacgcccaaggggggcacc
cacgtcgccgggttcgagcaggcgctgctcaaggtgttccggcgccagctggagatcaac
ggccggcggctcaaggtcggcaacgacaagcccgacaaggacgacgtcctcgcaggcatg
actgcggtcgtcacggtccgcctggccgagccccagttcgagggacagaccaaggaggtc
ctgggcaccaacgccgtgcgcgccatcgtcgccagggtcgtcgagaccgagctgacggcg
aggctgacctcgaccaagcgcggcgacaaggcgcaggccgcgctgctgctcgagaaggtc
gtctccgagatgaagtcgcggatcagcgcgcggctgcacaaggagacgcagcgccgcaag
aacgccttggagagctcgaccctgccgaccaagctccgggactgccgcaccaacgacgtc
gaccggtcggagctgttcatcgtcgagggcgactcggcgatgggcaccgccaaggaggcg
cgcaactcggagttccaggcgctgctgccgatccgcggaaagatcctcaacgtccagaag
gcctcggtgtcggacatgctcaagaacgccgagtgtgcttcgatcatccaggtcatcggc
gccggctcgggacgcagcttcgacctcgcggccgcccgatacggcaaggtcatcatcatg
accgacgccgacgtcgacggcgctcacatccgcaccctgctgctgaccctcttcttcagg
tacatgcgtccgctcgtggaggccggccgcgtctacgccgcgatgcccccgctgcaccgc
atcgaggtggtcaacgccggcgcgaagaagaacgagctcatctacacgtacaacgagatc
gagatgcgtcgcacggtcgcccgcctggagaagaccggcaagaagatcaagcagccgatg
cagcggtacaagggcctcggcgagatgaacgccgaccagctcgcggacacgacgatggac
ccgcggcaccgcaccctgcggcgggtcaccatgcgggacttcgaggcggccgaggggacc
ttcgagctgctcatgggcaacgaggtggcaccgcgcaaggacttcatcatcgagtccgct
gcggaggtcgaccgcgagcggatcgacgcctga
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