Intrasporangium calvum: Intca_1975
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Entry
Intca_1975 CDS
T01385
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ica
Intrasporangium calvum
Pathway
ica00061
Fatty acid biosynthesis
ica00071
Fatty acid degradation
ica01100
Metabolic pathways
ica01212
Fatty acid metabolism
ica02024
Quorum sensing
ica04146
Peroxisome
Module
ica_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ica00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Intca_1975
00071 Fatty acid degradation
Intca_1975
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Intca_1975
09145 Cellular community - prokaryotes
02024 Quorum sensing
Intca_1975
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ica01004
]
Intca_1975
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ica04147
]
Intca_1975
Enzymes [BR:
ica01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Intca_1975
Lipid biosynthesis proteins [BR:
ica01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Intca_1975
Exosome [BR:
ica04147
]
Exosomal proteins
Exosomal proteins of breast milk
Intca_1975
Exosomal proteins of breast cancer cells
Intca_1975
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ADU48486
UniProt:
E6SBX7
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All DBs
Position
2220783..2222573
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AA seq
596 aa
AA seq
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MKDKDVAAVVPTTTEGTLAELPRRNAKRAPTDAAFSKKGADGQWTHVTWGEFAAEVTALA
KGLIAAGVDQGDRIGLMCRTRYEWTLVDFAAWSAGAVVVPIYETSSPEQVEWILSDSGAK
LVVVESPTHRDTVEQVRDRVSTLGDVYTVDEGDLDRLTALGRDVPDDALAEAQSGLDRTS
VATIIYTSGTTGRPKGVQLTHGNFLDLVENAIEKLGAAVLAPGSSTLLFLPLAHVFARFI
EVLCVASSVRMGHTADAKAVVEDFGTFRPTFILAVPRVFERVFNAAEAKAAAGGKDKIFH
RAATVAIAHSEALDHGGPGLSLRLQHALFDKLVYSKLRAAMGGQVRYAVSGGGPLGTRLG
HFFRGIGINILEGYGLTETTAPVAVNVPDKVKIGTVGPPLPGTSIRIADDGEILVRGVGV
FNAYHDNEQATSEAIRDGWFHTGDLGDLDEDGYLRITGRKKEILVTSGGKNVAPAVLEDR
LRAHPLVSQCIVVGDQKPFIAAMVTLDPEMWPLWAASHGLENVSIEEARSHPKVLEVIQH
AVDRANEAVSKAESIRKFVVLSGDFTEANGYLTPSLKMKRNIVMKDFATEVEKLYS
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggacaaggacgtcgccgcagtcgtgccgacgacgacggagggaacgctggccgag
cttcctcgccgcaacgccaagagagcaccgacggacgcagcgttctcgaagaagggcgct
gacggccagtggacccatgtcacctggggtgagttcgcggccgaggtgaccgcgctcgcg
aagggcctcatcgccgccggcgtcgaccagggtgaccggatcggcctgatgtgccggacc
cgctacgagtggaccctcgtcgacttcgcggcatggtccgcgggcgcggtcgtcgtcccc
atctacgagacgtcgtctcccgagcaggtcgaatggatcctctccgactcgggagccaag
ctcgtcgtcgtcgagtccccgacgcatcgggacaccgtggagcaggtccgggaccgtgtc
tccaccctgggcgacgtgtacaccgttgacgagggagacctcgaccggctcacggccctg
ggtcgcgacgtcccggacgacgctctcgccgaggcgcagtcaggtctcgaccggacgtcg
gtcgccaccatcatctacacctccggcacgaccggtcgccccaagggcgtccagctgacc
cacgggaacttcctcgacctggtcgagaacgccatcgagaagctcggcgccgccgtgctt
gcccccgggtcctcgaccctgctcttcctccccctcgcccacgtcttcgcccgcttcatc
gaggtgctgtgtgtcgcgtcttcggtgcgcatgggccacaccgcggacgcgaaggcggtc
gtggaggacttcggcaccttcagaccgacgttcatcctcgccgtcccgcgcgtcttcgag
cgagtcttcaacgccgcggaggcgaaggcggcggccggcggcaaggacaagatcttccat
cgcgccgcgaccgtggcgatcgcccacagcgaagcgctcgaccacggtggccccgggctc
agtctccgactccagcacgccctcttcgacaagctcgtctacagcaagctgcgggcggcc
atgggcgggcaggtgcgctacgccgtctccggcggtggccccctgggcacccggctgggc
cacttcttccgcggcatcggcatcaacatcctcgaggggtacggcctgaccgagaccacc
gccccggtggcggtgaacgtccccgacaaggtgaagatcgggaccgtcggtccaccgctg
ccgggcacctccatccggatcgccgacgacggggagatcctcgtcaggggcgtcggagtg
ttcaacgcctaccacgacaacgagcaggcgacctcagaggccatccgggacggctggttc
cacacgggtgacctgggtgacctcgacgaggacggctacctgcgcatcaccggccgcaag
aaggagatcctcgtgacctccggcggcaagaacgtcgcacccgccgtcctcgaggaccgg
ctccgggcgcacccgctggtctcgcagtgcatcgtcgtcggtgaccagaagcccttcatc
gccgccatggtcaccctcgatcctgagatgtggcccttgtgggcggcctcgcacggcctc
gagaacgtctccatcgaggaggcgcggagccacccgaaggtcctcgaggtgatccagcac
gccgtcgaccgggcgaacgaggcagtgagcaaggcggagtcgatccgcaagttcgtcgtc
ctctcgggagacttcaccgaggcgaacggctacctcacgccgtcgctcaagatgaagcgg
aacatcgtgatgaaggacttcgcgaccgaggtggagaagctctactcctga
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