Intrasporangium calvum: Intca_1978
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Entry
Intca_1978 CDS
T01385
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ica
Intrasporangium calvum
Pathway
ica03030
DNA replication
ica03430
Mismatch repair
ica03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ica00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Intca_1978
03430 Mismatch repair
Intca_1978
03440 Homologous recombination
Intca_1978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ica03032
]
Intca_1978
03400 DNA repair and recombination proteins [BR:
ica03400
]
Intca_1978
Enzymes [BR:
ica01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Intca_1978
DNA replication proteins [BR:
ica03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Intca_1978
DNA repair and recombination proteins [BR:
ica03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Intca_1978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
UVR
DEDDh_C
DUF7508
Motif
Other DBs
NCBI-ProteinID:
ADU48489
UniProt:
E6SBY0
LinkDB
All DBs
Position
2224478..2226250
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AA seq
590 aa
AA seq
DB search
MQAIQATFDDLGTRLADVTFVVVDLESTGGSPAQCGITEIGAVKVRGGDVIGEFQTLVNP
AEPIPAFISVLTGITDAMVADSPRIESAFPAFLEFAAGSVLVAHNAGFDISFLKAAAVRT
GTPWPGFDVLDTLTLARQLVTRDEVPNHKLSSLARVFASPTTPDHRALHDARATVDVLHG
LIERVGNLGVHTLEELASYTSRVSPAQRRKRFLADALPHAPGVYLFKDGDGRVLYVGTSR
DIRSRVRSYFTAAEQRSRMADMVRLAHAVTPVVCQTPLEAQVRELRLIDEHQPRFNRRSK
NARRQLWVKLTSERFPRLSIVRQVRDEGGHHIGPFRSRVTAQAAVDAVHEIVPLRQCTQR
ITGTESACALAELGRCGSPCTGAQSRDDYARVVADCAALFSGDARGGGDKLRSRLAELAA
QERFEDAARVRDRFLHLVRGAARSQRLTPLMQARELVAARRGESDGWEIVCIRQGRLAGT
VVSPRGGDPMVHVRVLQATAEVVPTPEPGATAALIEETEILLRWLESPGVRIVELDGSWT
CPVGGAGALRRELEPAVAAAHEVVGFDRDAGDAGRDFPRRAARDRHRRAG
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgatccaggcgacgttcgacgacctcggcacccggctcgccgacgtcaccttc
gtcgtcgtggacctcgagtcgaccggcgggagcccggcgcagtgcggcatcaccgagatc
ggcgcggtcaaggttcgtggtggcgacgtcatcggcgagttccagaccttggtcaacccc
gccgagccgatcccggccttcatctcggtgctgaccgggatcaccgatgcaatggtggcc
gactccccgcggatcgagtcggccttccccgcgttcctcgagttcgctgccggcagcgtc
ctggtggcccacaacgcgggcttcgacatcagcttcctcaaggcggccgcggtgcgcacc
ggcacaccgtggcccggtttcgacgtgctcgacaccctcactctggcgcgtcagctggtc
acccgggacgaggtgccgaaccacaagctctcgtccctcgcgcgggtcttcgcctccccc
acgacccccgaccaccgggcactgcacgacgcgcgagccacggtcgacgtgctccacggc
ctgatcgagcgggtgggcaacctcggcgtccacaccctcgaggagctggccagctacacc
tcccgcgtctcgcccgcgcagcgccggaagcgcttcctcgccgacgcactcccccacgcc
cctggcgtctacctcttcaaggacggagacggacgcgtcctctatgtcggcaccagccgt
gacatccgctcccgcgtccgcagctacttcacggccgcggagcaacgcagccggatggcc
gacatggtccgtctggcccacgccgtgacaccggtcgtctgccagacgcccctcgaggcg
caggtgcgcgagctgcgactcattgacgagcaccagcccaggttcaaccgcaggtccaag
aacgctcggcgccagctctgggtcaaactgaccagcgagcgcttcccccggctgtccatc
gtgcggcaggtgcgcgacgaaggtggccaccacatcgggcccttccgctcgcgcgtcacc
gcccaagccgccgtggacgcggtgcacgagatcgtccccctccgccagtgcacccagcgc
atcaccggcacggagtcagcctgcgcgctggctgagctgggacgatgcggttcgccgtgc
accggcgcccagtcgcgggacgactacgcacgtgttgtcgccgactgtgcggcgctcttc
tccggcgatgcgcgcggcggaggcgacaagctgcgctcgcgcctcgcggagctcgcggcc
caggagcgcttcgaggacgctgcgcgcgtccgggaccgcttcctccacctcgtccggggg
gccgctcggtcccagcgcctcaccccgttgatgcaggcccgagagctggtggctgcccgg
cggggcgagagcgacggctgggagatcgtctgcatccggcaaggtcgacttgccggcacc
gtcgtcagcccgcgtggtggtgaccccatggtccacgtgcgcgtcctccaggcgaccgcg
gaggtggtccccaccccggagccgggcgcgacggccgcgctcatcgaggagaccgagatc
ctgctccgttggctcgagtctccgggggtgcgcatcgtcgagctggacggctcgtggacc
tgcccggtcggaggggccggcgcgctgcgtcgggagctcgagccggccgttgccgccgcc
catgaggtggtcggcttcgaccgcgacgcaggtgacgcaggtcgtgacttcccgcggagg
gcggcccgggaccgccaccgccgggcgggatag
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