Intrasporangium calvum: Intca_2085
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Entry
Intca_2085 CDS
T01385
Name
(GenBank) Cadherin
Organism
ica
Intrasporangium calvum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_5
Cadherin
CopC
Cadherin_4
PASTA
Motif
Other DBs
NCBI-ProteinID:
ADU48595
UniProt:
E6SD07
LinkDB
All DBs
Position
2333702..2338846
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AA seq
1714 aa
AA seq
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MSPRLGARIAARFPARIAALLGLVLVVGMLSPLRGAAEEGPTELQYACALKSNGTMRLAE
GPGDCGKKETLVTFKPGTVQLCVQPSGSVRLLSSFRDCRPPASQLTVPPTSGATYFCAAA
GSGVLRWVGDPGECLATELALQVTPNDDAPTVASTVPGNGGLTARDSSVSITFSEDVSAF
ADAFTIICGGVTIPFALSGLPGSTATLTPDGDLPMGAACTVTTTASLVSDTDTNDPPDSM
ADDHVFSFTVDAPPIVTSTTPAAGATDVAVDVDLVVTFSEPVTAPASAFTLTCDVGGAIA
VVAAGSPGTSITLTPTARLLPADACELVVDASQISDEDAADPPDHPSADHTVAFVTADVA
PAVTDTVPLDDAAHVATDTQVRATWSEAVTAGANAIVLDCGSGPVAGAISGSPGMTTTFT
PDAALPDGATCTVVVDHTEVKDVDAVDPPDRPDADHTFSFATDAAPTFVSSSPADGTAGV
DPAADIVLTFSEAVTATASAFTLTCDATERSVAVGGSGTDTLTLTPTGVPQTATCSLTVL
GARVHDADAFDPPDTMAADATIAYTTVDTAPEVVATTPTDGATDVPAGTDITVTFSEAVD
VAAGGLALECPSGSPVSFTTGEGAGNVWTLAPDGPLPADIVCTVTVSGSAVSDDDSIDPP
DRMAADHTFSFTVSANSAPTDITLNPASVQENQPAGTTVGTLSTIDGDPGETFSYTLVEG
PGNTDNALFAIDGSSLTTAAGLDFETASTRSIRVRTTDSAGDHFDKALVVTVIDLNEAPT
DVALSSSSVDENQPSGTTVGLLSGTDPDLGDTLSFSIVPGAGDTDNAAFSISGTTLVTAA
VLNFEVRSSLSIRVRVTDSGSLTHEEVLVISVVDVNDPPVAVTDAYADAIGNTLAVVQTT
GTGPHKVLTGNVLTSNDTDEDATYPHTLTAVAQTVSSVGGGTATIAGNGSFTFLPGVGDT
SQTDSFTYQVTDGELTSGGTVTVSIGSDIVWYVNGASGSAMHDGRSSSPLLSLAGLGGVD
PDGPGDTIFVYGGSYGGGLVLEGNQQLLGQPNGLTIGGTELVTASGVNPVITNAAGAALT
LASGVDVQGVTVSGASGAGVVGTGVTTATIGTRTAVQVTGNGADGVSLTGGSGAVTVAAG
ISGNAGRAVTMSNRTGGTTSFSGAVSGGVTLSANSGATVQLTGGVNASTGTAPAFSATGG
GTVVVTGSANTLATTTGTALVVDATAIGAGGLTFRSISANGAVNGIRLNGTGSQGSLSVT
GTGSTVLGGDGSGGTIQNTTGAGVLLTNTTGTSLNNLSLVNTAGGPGVDGTGVSGFSFTN
GSINGSGATSRAPHDSNIAFNDDGATVTNLSGAVTVSNSTLFGAFQHGVDILNNAGTIAN
LQLTGNQITSPVAQTDSLGSGIRVNELGSASTVSSVTKGSISGNDITGFPTGGGIVLQGG
NTAAAGAPAGTFGTAGNGNAVVVAGNLIRGHSTTNPMNTNCILVTMPARGTGYIDITGNG
TVGTPLGLNRGSCISVNVFGDYHLVGKVNNNQVRPQTQIGGAFGITFGTASQTVGGAVLD
SAVLDLAVQNNTVSGTTNSGIRSGTLNSGTTRARVTGNTVAAPTDLSGAYGIRVDSGNTS
SLDTSVCLELSGNTTAGSVSSGTGSTAPGLGLRKQGSVATTNDFGIVGLSPSPADPSQTV
AYVTTQNPGSAAGTSGARVEIVSGSSFVSCVLPF
NT seq
5145 nt
NT seq
+upstream
nt +downstream
nt
atgtccccccgtcttggcgcccgcatcgcagcccgtttcccagcccgcatcgccgccctc
ctggggctggtgctcgtcgtcgggatgctgtcccccctgaggggggccgccgaggagggc
ccgacggagcttcagtacgcctgcgcactgaagagcaacggcaccatgcgcctcgccgag
ggtcccggggactgtggcaagaaggagacgctggtcacgttcaaacctggcacggtccag
ctgtgcgtccagccctccggctcggtccggctgctcagcagcttccgcgactgccgtccg
ccggcgagtcagctcacggtcccgcccacctccggcgcgacgtacttctgcgccgcagcg
ggcagcggggtgctgcgctgggtcggcgaccccggcgagtgtctggcgaccgagctcgcg
ctccaggtcaccccgaacgacgacgcgccgacggtcgcctccaccgtcccgggcaacggc
gggctgaccgctcgtgactcgagcgtgtccatcacgttcagcgaggacgtcagtgccttc
gccgacgccttcaccatcatctgcgggggcgtgacgatcccgttcgcgctgagtgggctc
cccgggagcacagccaccctcacccccgatggtgacctgcccatgggcgcggcctgcacg
gtcacgacgacggcaagcctggtcagcgacaccgacacgaacgacccgcccgactcgatg
gctgacgaccacgtcttcagcttcaccgtcgacgcgccaccgatcgtcacctcgaccact
ccagcggcgggcgcgaccgacgtggcggtcgacgtggacctcgtcgtgacgttcagcgag
ccggtcacggcgcccgcttcagccttcaccctcacctgcgacgtcgggggtgccattgcc
gtcgtggcggccggctccccggggacgagcatcacgctcacccccacggcgcgcctgcta
ccagccgacgcgtgcgagctcgtcgtcgacgcgagccagatcagcgacgaggacgcagcg
gacccgcccgaccacccgagcgccgaccacaccgtcgcgttcgtcaccgcggacgtggcc
cccgcagtcacggacacggttcccctcgacgatgcggcccacgtggcgacggacacgcag
gtgcgggcgacctggagcgaggcggtcacggcgggggcgaacgcgatcgtcctcgactgt
ggctcagggccggtggccggtgcgatcagcggctcccccggcatgacgacgaccttcacc
cctgacgccgccctccccgacggggccacgtgcaccgtggtcgtcgaccacaccgaggtc
aaagacgtcgacgcggtggacccgccggaccgcccggacgccgaccacaccttctccttc
gcaaccgacgcggcgcccacgttcgtgtcctcgtccccggcggacgggacggccggcgtc
gaccccgccgcggacatcgtgctcaccttcagcgaagcggtgaccgccaccgcctcggcc
ttcacgttgacctgcgatgcgactgagcgctcggtggccgtcggcggctcggggacggac
acgctcacgctgaccccgacgggcgtcccacagactgcgacctgttcactcaccgtcctc
ggggcccgtgtccacgacgccgacgcgttcgaccctcctgacaccatggcggccgacgcc
acgatcgcctacaccacggtcgacaccgctcccgaggtggtcgcgaccacacccacggac
ggcgccacggacgttcccgccggcaccgacatcacggtgaccttcagcgaggcggtcgac
gtcgccgcgggcggtctcgccctcgagtgcccgagcggctcgccggtctcgttcacgacc
ggggagggcgccggcaacgtctggaccctcgccccggacgggcccctgcccgcggacatc
gtctgcaccgtcaccgtcagcggttctgccgtgagcgatgacgactccatcgacccgccc
gaccggatggccgccgaccacaccttcagcttcaccgtcagcgccaactcggccccgacg
gacatcacgctcaacccggcgagtgtccaggagaaccagcccgccggaaccacggtcggt
accctctcgacgatcgacggtgaccccggtgagacgttcagctacaccctcgtcgagggc
ccgggcaacaccgacaacgcgctcttcgccatcgacggaagctcgctcacgacggctgct
ggcctcgacttcgagaccgcgtccacccgcagcatccgggtgcggacgaccgactcggcg
ggcgatcacttcgacaaggccctcgtggtcacggtcatcgacctcaacgaggccccgacc
gacgtcgcactctcgtcgagctcggtcgacgagaaccagccgagcggtacgacggtcggc
ctgctctccggcaccgaccccgacctcggagacacgctgagcttcagcatcgttcccgga
gcaggcgacacggacaacgcggccttcagcatctccggcacgacgctcgtgactgccgct
gtcctcaacttcgaggtgaggtcgagcctctcgatccgggtccgggtcaccgactcggga
tccctcacccacgaggaggtcctcgtcatctccgtggtcgacgtcaacgacccaccggtg
gccgtgaccgacgcctacgccgatgcgatcggcaacacgctcgccgtcgtgcagacgacc
ggcaccgggccccacaaggtgctcaccggcaacgtcctcacgagcaacgacaccgacgag
gatgccacctacccgcacactctgaccgccgtcgcccagacggtgtcctcggtcggcggc
ggcacggcgaccatcgcgggcaacggctccttcacgttcctgccgggcgtcggggacacc
agccagacggactccttcacgtatcaggtcaccgacggcgagctgaccagcggcggcacc
gtcacggtgagcatcgggtccgacatcgtctggtacgtcaacggcgcctccgggtccgcc
atgcacgacggccgatcgtcctcgccgctgctctcgctcgcggggcttggcggagtcgac
ccagacggccccggagacacgatcttcgtctacggcggcagctacggcggcggcctggtg
ctcgagggcaaccagcagctgctcggtcagccgaacgggctgaccatcgggggtacggag
ctcgtgaccgcgagcggggtgaacccggtcatcaccaatgcggcgggtgcagcactcacg
ctggccagcggcgtggacgtccaaggtgtcaccgtgagcggcgcctcgggtgccggcgtc
gtgggcactggtgtcacgaccgcgacgatcgggacccggaccgctgtccaggtcaccggc
aacggtgcggacggggtcagcctcaccggcggatccggcgcggtcaccgtcgcggcaggc
atcagcggaaatgccgggcgagcggtgaccatgtcgaaccgcaccggtggcaccacgagc
ttcagcggagcggtctcgggcggcgtcacgctctccgcgaactcaggagcgacggtccag
ctgaccggcggggtgaacgcctcgaccgggaccgcgccagcgttcagcgcgacgggtggt
ggcaccgtcgtcgtcaccggctccgccaacacgttggccacgacgaccggcaccgcgctc
gtcgtcgacgccaccgccatcggagcggggggcctcaccttccggagcatcagcgccaac
ggcgccgtcaacgggatccgcctgaacggcaccggcagccagggctcactctcggtgacc
ggcaccggatcgacggtcctcggcggggacggctccggcggaacgatccagaacaccacc
ggagcgggcgtcctgctcacgaacacgacggggaccagcctcaacaacctctcgctggtc
aacacggcggggggccccggtgtcgacggcacgggcgtcagcgggttctccttcaccaac
ggctcgatcaacggcagcggcgcaacgagccgcgcgccccacgactcgaacatcgccttc
aacgacgacggtgcgaccgtgaccaacctcagcggcgccgtcaccgtgtcgaactccacg
ctgttcggcgccttccagcacggggtcgacatcctcaacaacgccggcacgatcgccaac
ctccagctgaccggcaaccagatcaccagccctgtcgcgcagactgactcgcttggctcg
gggatccgggtcaacgagctcgggtcggccagcacggtgagcagcgtcaccaagggctcg
atctccgggaacgacatcaccgggttcccgaccggtggcggcatcgtcctgcagggcggc
aacaccgccgctgccggagcaccggccgggacgttcggcaccgcgggcaacggcaacgcg
gtcgtcgtggcgggcaacctgatccgcggccacagcacgaccaacccgatgaacaccaac
tgcatcctcgtcaccatgcccgcccgggggaccggctacatcgacatcacgggcaacggg
acggtcggcacgccactcgggctcaaccggggcagctgcatctcggtgaacgtcttcggc
gactaccacctcgtgggcaaggtgaacaacaaccaggtcaggccgcagacgcagatcggc
ggcgccttcggcatcaccttcggaacggcgtcccagaccgtgggaggggcggtgctcgac
agtgctgtgctcgacctggcagtacagaacaacaccgtctccggcaccaccaactcgggg
atcaggtccgggaccctcaacagcgggaccacccgcgcacgggtcaccggcaacacggtg
gcggcaccgacggatctcagtggcgcctacggcatccgggtcgactcgggcaacacgtcg
tcgctcgacacctcggtctgcctcgagctgtccggcaacaccaccgcaggcagcgtcagc
agcggcaccggtagcaccgcccccggtctcggcctgcgcaagcagggttcggttgccacg
accaacgacttcggcatcgtcgggttgagccccagtccggcagacccgtcgcagaccgtg
gcgtacgtcacgacccagaatcccggcagcgcagcaggaacgagcggggcccgggtcgag
atcgtcagcggcagcagcttcgtctcgtgcgtcctgccgttctga
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