Intrasporangium calvum: Intca_2176
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Entry
Intca_2176 CDS
T01385
Name
(GenBank) SSU ribosomal protein S12P methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ica
Intrasporangium calvum
Brite
KEGG Orthology (KO) [BR:
ica00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ica03009
]
Intca_2176
Enzymes [BR:
ica01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Intca_2176
Ribosome biogenesis [BR:
ica03009
]
Prokaryotic type
ribosomal protein modification factors
Intca_2176
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
ADU48685
UniProt:
E6SDN3
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All DBs
Position
complement(2428281..2429750)
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AA seq
489 aa
AA seq
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MTPPPPTATRSVALVTLGCTRNEVDSEELAGRLQAEGWTLVEDAAEADVAVVNTCGFVEQ
AKKDSIDALLEASDLKADGRTRAVVAVGCLAERYGKDLAEQLPEADAVLGFDSYQDMSSH
LQTILGGGHVPSHTPGDRRRLLPLTPSARPAEAVRVALPGHGDHPEPYAAGPGPAPASGP
RVVRARLDGRPWAPLKIASGCDRRCSFCAIPMFRGAFVSRRPADVIAEARWLAGQGVKEL
FLVSENSTSYGKDLGDLGLLEKLLPELTAVEGIERVRVSYLQPAEIRPGLLDAMAGTPGV
VPYYDISFQHASEPVLRRMRRFGSRAAFLDLVARVRASAPEAGIRCNVIVGFPGETEADV
AELEAFLTEARLDVVGVFGYSDEDGTEAEGHGEKVAADVIADRLERLTRLVEELTAQRAE
ERIGDLVEVLVEEIDEDDGRLVGRAAFQGPDVDGVTYIEPTPGRPTVVGDLVSAVVVATE
GIDLVAEPA
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaccccacccccaccgactgcgacccgcagcgtcgccctggtcaccctggggtgcacc
cgcaacgaggtcgactcggaggagctggccggccggctccaggcggaggggtggaccctc
gtcgaggacgccgccgaggcggacgtcgccgtcgtcaacacgtgcggcttcgtcgagcag
gccaagaaggactcgatcgacgcgctgctcgaggcctccgacctcaaggcggacggccgc
acgagggccgtcgtcgcggtggggtgcctggcggagcgctacggcaaggacctcgcggag
cagctgccggaggccgacgccgtgctcggcttcgactcctaccaggacatgtcgagccac
ctccagaccatcctcggcgggggccacgtgcccagccacaccccgggggaccggcggcgg
ctcctcccgctgaccccctcggcgcgcccggcggaggccgtgagggtcgccctccccgga
cacggggaccaccccgagccgtatgccgctgggcccggtcccgctcccgccagcggtccc
cgcgtggtgcgggcccgtctggacgggcggccctgggcgccgctcaagatcgcgtccggg
tgcgaccgtcgctgctccttctgcgccatcccgatgttccgcggggcgttcgtctcccgc
cggccggccgacgtcatcgccgaggcgcggtggctcgccggccagggggtcaaggagctg
ttcctcgtctcggagaactccacctcctacggcaaggacctcggagacctcggcctgctc
gagaagctcctgcccgagctgaccgcggtcgagggcatcgagcgggttcgggtcagctac
ctgcagcccgccgagatccggcccggactgctcgacgccatggcaggcacgccgggagtc
gttccgtactacgacatctccttccagcacgcctcggagccggtgttgcgacggatgcgc
cgattcggctcgcgcgcggccttcctcgacctcgtcgcgagagtccgagccagtgccccg
gaggccggcatccggtgcaacgtcatcgtcggcttccccggggagaccgaggccgacgtc
gcggagctggaggcgttcctcaccgaggcccgcctcgacgtcgtcggggtcttcggctac
tccgacgaggacggcaccgaggcagagggccacggcgagaaggtggctgctgacgtcatc
gccgaccgcttggagcgcctgacccggctggtcgaggagctcacggcccagcgggccgag
gaacgcatcggcgacctcgtcgaggtgctcgtggaggagatcgacgaggatgacggacgg
ctcgtcggacgcgcggccttccagggcccggacgtcgacggcgtcacctacatcgagccg
acgccggggcggccgacggtggtgggtgatctcgtctccgctgtcgtcgtggccaccgag
ggtatcgacctcgtggcggagccggcatga
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