Intrasporangium calvum: Intca_2223
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Entry
Intca_2223 CDS
T01385
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ica
Intrasporangium calvum
Brite
KEGG Orthology (KO) [BR:
ica00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ica03016
]
Intca_2223
Enzymes [BR:
ica01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Intca_2223
Transfer RNA biogenesis [BR:
ica03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Intca_2223
Prokaryotic type
Intca_2223
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
DUF6255
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ADU48732
UniProt:
E6SE84
LinkDB
All DBs
Position
complement(2484751..2485689)
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AA seq
312 aa
AA seq
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MTAPSGLLVVDKAAGWTSHDVVARARRLCGTRRVGHAGTLDPMATGVLVLGVEKGTKLLT
FLVGCDKEYRATIRLGQATVTDDAEGDPTTSLGVADPGGLEARLGDAVSGLTGHIRQVPS
AVSAIKVRGERSYVTVRKGGVVDLPARPVTVSRFDVLSVTRTTSALPDGGALDVVDVDVE
VEVSSGTYVRALARDLGAALGVGGHLTALRRTRVGRFDLTMAVSLDELADGADDRAHPEL
PIVPVAEAARAQLPVHEVSADEARSLGHGQRIAAGEVRAEAVAAIDPDGRLVAVLDETRT
MAKARVVFAPAD
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcaccgagcggtctgctcgtcgtcgacaaggccgccggctggaccagccacgac
gtggtggccagggcgcgacgactgtgcgggacgcgccgggtcggccatgccggcaccttg
gacccgatggcgaccggggtgctcgtcctcggcgtggagaagggcaccaagctgctcacc
ttcctcgtcggctgcgacaaggagtaccgggcgacgatccggctggggcaggcgacggtc
accgacgacgcagagggtgatccgacgacatccctgggtgtcgccgaccctggcgggctc
gaggcccgcctgggggacgcggtgtcggggctgaccggccacatccggcaggtgccgagc
gcggtgagcgcgatcaaggtgcgcggggagcgcagctatgtgacggtccgcaagggcggg
gtcgtcgacctgccggctcgacccgtgaccgtgtcccgcttcgacgtcctctcggtgacg
cgaaccacctcggcactgccggatggcggtgccctcgatgtggtcgacgtcgacgtcgag
gtggaggtgtcctcggggacgtacgtccgtgcgctcgctcgggacctcggcgccgccctc
ggcgtcggggggcacctgaccgcgctgcggcggacccgcgtgggccggttcgacctgacc
atggcggtgtctctggacgagcttgctgacggggcagacgaccgggctcacccggagctg
ccgatcgtccccgtggccgaggctgcgagagcccagctcccggtccacgaggtgtctgct
gacgaggcgcgcagcctcggccacggccagcggatcgcggctggcgaggtccgggccgag
gcggtcgcggccatcgacccggacgggcgcctcgttgccgtcctcgacgagacgcgcacc
atggccaaggcccgggtcgtcttcgcgcctgccgactga
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