KEGG   Intrasporangium calvum: Intca_2296
Entry
Intca_2296        CDS       T01385                                 
Name
(GenBank) signal recognition particle subunit FFH/SRP54 (srp54)
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
ica  Intrasporangium calvum
Pathway
ica02024  Quorum sensing
ica03060  Protein export
ica03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ica00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Intca_2296
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Intca_2296
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Intca_2296
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ica02044]
    Intca_2296
Enzymes [BR:ica01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Intca_2296
Secretion system [BR:ica02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Intca_2296
  Eukaryotic Sec-SRP protein
   Intca_2296
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA cobW nSTAND3 AAA_22 ArsA_ATPase AAA_26 APS_kinase Zeta_toxin AAA_33 ATP_bind_1 MMR_HSR1 AAA_18 AAA_31 MobB 6PF2K NACHT TsaE MeaB
Other DBs
NCBI-ProteinID: ADU48805
UniProt: E6SF16
LinkDB
Position
complement(2562223..2563845)
AA seq 540 aa
MFATLSDRLTATFKNLRGKGRLSESDVNKAVRDIRLALLDADVALPVVKRFTTAVRERAL
GEEVNQALNPAQQVVKIVNEELVTILGGETRQIRFAKNPPTVIMLAGLQGSGKTTFAGKL
GRWLKDRGHTPLLVAADLQRPNAVTQLEVVGERAGLKVFAPERGNVGGHDAVAGTGEGTR
SFGDPVSVSRAGVEHARAQQHDVVIVDTAGRLAVDTNLMQQAADIRSAIQPDEVLFVIDA
MIGQAAVETAQAFHEGVAFTGVVLSKLDGDARGGAALSIREVTGEPIMFASVGEKVTDIE
VFHPDRMAGRILDMGDVLTLIEQAEKAFDKRQADEMARKFLAEEDFTFEDFLQQMSAIKQ
MGSLKSMLKMMPGMQQMRAQLDAFDDREFDRVEAMVRSMTPFERTHPKQINGSRRARIAK
GSGVSVTDVNQLLERFRDAQKMMKSLARGGGGGLPGMPGIPGTGKKGRAQQPQRKKSKSG
NPAKRAAEERAAAQRAAEGRSKAAASAFGMPGASPDGADPLADLDVSKLPKGFEKFLGKG
NT seq 1623 nt   +upstreamnt  +downstreamnt
gtgttcgcaaccctgtctgaccggctgaccgccaccttcaagaacctgcgcggcaagggc
cgcctttcggagtccgacgtcaacaaggcggttcgagacatccggctggccctcctcgac
gccgacgtggcgctgcccgtcgtcaagcggttcacgacggccgtgcgggagcgcgcgctc
ggcgaagaggtcaaccaggcactcaaccccgcccagcaggtcgtcaagatcgtcaacgag
gagctcgtcaccatcctcggtggcgagacccgccagatccggttcgcgaagaaccccccg
acggtcatcatgctcgccgggctgcagggctcgggcaagacgaccttcgcgggcaagctc
ggccgctggctcaaggaccgcgggcacacgccgctgctcgtggccgccgacctgcagcgc
cccaacgccgtcacccagctcgaggtcgtcggcgagcgcgccggcctcaaggtcttcgct
cccgagcgtggcaacgtcggcggccacgacgccgtcgcagggacgggggagggcacccgc
agcttcggcgacccggtgtccgtctcccgggccggagtcgagcacgcccgcgcccagcag
cacgacgtcgtcatcgtcgacaccgccggacggctcgccgtcgacaccaacctcatgcag
caggcagccgacatccgctcggcgatccagcccgacgaggtcctcttcgtcatcgacgcg
atgatcggccaggccgcggtcgagaccgcgcaggccttccacgagggcgtcgccttcacc
ggcgtcgtgctctccaagctcgacggcgacgcccgcggtggtgccgccctgtcgatccgt
gaggtcaccggcgagccgatcatgttcgcctccgtcggcgagaaggtcaccgacatcgag
gtgttccaccccgaccggatggccggccggatcctcgacatgggcgacgtgctcaccctc
atcgagcaggcggagaaggcgttcgacaagcgccaggccgacgagatggcgcgcaagttc
ctcgccgaggaggacttcaccttcgaggacttcctccagcagatgagcgccatcaagcag
atgggctcgctcaagtcgatgctcaagatgatgccgggcatgcagcagatgcgggcccag
ctcgacgcgtttgacgaccgcgagttcgaccgggtcgaggcgatggtgcgctcgatgacc
ccgttcgagcggacccacccgaagcagatcaacgggtcacggcgggcccggatcgccaag
ggctccggcgtctccgtgaccgacgtcaaccagctcctcgagcggttccgggacgcgcag
aagatgatgaagtcgctcgcccggggcggtggcggcggtctgccgggcatgcccggcatc
cccggcaccggcaagaagggccgggcccagcagccgcagcgcaagaagagcaagagcggc
aacccggccaagcgggccgcagaggagcgcgccgctgcgcaacgggccgccgagggccgg
tccaaggcggcagcgtcggcgttcggcatgcccggtgcgagcccggacggcgccgacccg
ctggccgacctcgatgtctccaagctccccaagggcttcgagaagttcctcggcaagggc
tga

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