Intrasporangium calvum: Intca_2467
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Entry
Intca_2467 CDS
T01385
Name
(GenBank) transcriptional regulator, LacI family
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
ica
Intrasporangium calvum
Brite
KEGG Orthology (KO) [BR:
ica00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ica03000
]
Intca_2467
Transcription factors [BR:
ica03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Intca_2467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
Xre-like-HTH
HTH_3
TetR_N
DUF5721
Motif
Other DBs
NCBI-ProteinID:
ADU48974
UniProt:
E6S740
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Position
2760949..2762001
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AA seq
350 aa
AA seq
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MEKAVTIYDVAKAAGVAPSTVSRAFSRPGRLNAATAERILRVGAALGYQRGGAGRDGAGS
AAGAADMAGAPGGGPGRPAAHMIALIVPDITNPFYFEIIRGAERAASEAGFTLVLSDTQE
SRRLERDALERTSSVVAGLLLTSTRMDDSEIVAVSRRTPLVVLNREVDGVPSVVTDNRAG
ARQAVEHLVDLGHSSVTYVAGPEASWADRQRWTAAQEACLERGVGVRRVGPFAPTVDAGR
YAAQAVLGHPGSAVLCYNDQLAIGLIRGLGLLGARVPDDVSIIGFDNTLVADLVTPGITT
VAAPLDSLGATGVNGLIGLVTGRRRPDPLVVLPSMLVVRGSTAAAVLWRP
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggcggtcacgatctacgacgtggcgaaagccgcaggggtcgcgccgtcgacg
gtctcacgggcgttctcccgtccgggccggctcaacgccgccacagccgagcggatcctc
cgggtcggggccgccttgggctaccagcgcggcggcgccggtcgcgacggcgccggcagc
gctgcgggcgctgcggacatggcgggcgctccgggcggtggtcccggccgaccggccgcg
cacatgatcgcgctcatcgttcccgacatcaccaacccgttctacttcgagatcatccgg
ggcgccgagcgcgctgcgtccgaggctgggttcacgctcgtcctctccgacacacaggag
tcgcgtcggctcgagcgcgacgccctcgagcggacgagctccgtcgtcgccggactgctc
ctgacgagcacgcggatggatgactccgagatcgtcgccgtgtcccgccggacccctctg
gtggtgctcaaccgggaggtcgacggcgtgccgagcgtcgtcaccgacaaccgggccggg
gcgcgccaggccgtcgagcacctcgtcgacctcgggcactcgtccgtcacctacgtcgcc
gggcccgaggcgtcctgggccgaccgccagcggtggaccgccgcgcaggaggcctgtctc
gagcggggcgtcggggtgcgccgcgtcggcccgttcgcgccgaccgtggatgccggccgc
tacgccgcccaggcggtcctgggacacccggggtccgccgtgctctgctacaacgaccag
ctcgccatcggactgatccggggtctcggactgctgggcgcccgggtccccgatgacgtg
agcatcatcggcttcgacaacaccctggtcgctgacctcgtcacaccgggcatcaccacg
gtcgcggcgccgctcgactccctcggcgcgacgggggtcaacgggctcatcggtctggtc
accggtcgacgccggccggacccgctcgtcgtgctcccgtcgatgctcgtcgtccggggc
tcgacggcagctgctgtcctctggcgcccctga
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