Intrasporangium calvum: Intca_2553
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Entry
Intca_2553 CDS
T01385
Name
(GenBank) ATP-dependent DNA helicase, Rep family
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ica
Intrasporangium calvum
Pathway
ica03420
Nucleotide excision repair
ica03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ica00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Intca_2553
03430 Mismatch repair
Intca_2553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ica03400
]
Intca_2553
Enzymes [BR:
ica01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Intca_2553
DNA repair and recombination proteins [BR:
ica03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Intca_2553
MMR (mismatch excision repair)
Other MMR factors
Intca_2553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ADU49059
UniProt:
E6S7W3
LinkDB
All DBs
Position
complement(2859271..2861412)
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AA seq
713 aa
AA seq
DB search
MSAALHPDDILERLDPEQREVASAPPGPLCVLAGAGTGKTRAITHRIAYAVHSGVQQPQR
ILAVTFTARAAGEMRTRLRALGVQGVQARTFHAAALRQLHYFWPQAIGGAAPEVMSVKAP
AVAEAASRLRLQFDRTAIRDLASEIEWSKVNLLTPQSYSAAARAAHREPPGLDLTAMARL
LEAYEDVKATRGVIDFEDVLLLTVGVLEDRDDIARTVRGQYRQFVVDEYQDVNALQQRLL
DLWLGGRDDVTVVGDPAQTIYSFTGASPEHLLRFPSRFPGARTVRLVRNYRSSPQIIQLA
NAVIASGPAGGRTASVALTAQGEPGPAPVLLEHSDDPAEAAAVAERIAKLIGGGHAAAEI
AVLFRTNGQSQAIESALAGSGVPYLVRGGERFFARREVRDAILLLRGAARSDDGSKPLGH
ITRDVISGAGWAPEPPTSGGATRERWESLNALAGLADDLAATAPDARLPELVSELDRRAS
EQHAPAVQGVTLASLHAAKGLEWDTVFLVGASDGLIPISLAEGADAVNEERRLLYVGVTR
ARRQLFLSWAAARNPGGRPTRRVSRFLGPAEGILGSGARAVTTARARTRGPKVAAVVTCR
GCGVVLTSAAHRKTGRCDDCPPTYDEALFERLRAWRLGVAREAGVPAFVVFTDATLTAIA
EREPADEPALSTISGVGARKLGQYGSDILALLGGADPEEVLQNRSAAAELTEA
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
ctgtccgccgcacttcacccggacgacattctcgaacggctcgaccccgagcagcgtgag
gtcgcctcggcgcctccggggccgctctgtgtcctggccggcgcgggcaccggcaagacc
cgcgccatcacgcaccggatcgcctacgccgtccactccggcgtgcagcaaccgcaacgg
atcctcgcggtgaccttcacggcccgcgccgccggggagatgaggacccgcctgcgggcg
ctcggggtgcagggcgtgcaggctcggacctttcacgcggccgctctcaggcagctgcac
tacttctggccccaggccatcgggggagcggcacctgaggtgatgagtgtgaaggcgccg
gcggtggcagaggccgcgagccgccttcgcctccagttcgaccggacggcgatccgcgac
ctcgcgtccgagatcgagtggtccaaggtcaacctcctcacgccccagtcctactccgcc
gcggcgcgcgcggcgcaccgggaaccgcccggtctcgacctcaccgccatggctcgcctg
ctggaggcctacgaggacgtgaaggccacccggggcgtcatcgacttcgaggacgtgctg
ctcctcaccgtgggtgtgctcgaggaccgggacgacatcgcacggacggtccggggccag
taccggcagttcgtcgtcgacgagtaccaggacgtcaacgcgctccagcagcggcttctc
gacctctggctcggcgggcgcgacgacgtgaccgtggtcggcgacccggcccagacgatc
tactccttcacgggcgcgtcccccgagcacctgctccgcttcccgtcgcggttccccggc
gccaggaccgttcggctcgtccggaactaccgctcgtcgccccagatcatccagcttgcc
aacgccgtcatcgcgtccggacctgccggcggtcggacggcctcggtcgccctcaccgcg
caaggggagccggggccggccccggtgctcctcgagcactccgacgaccccgcggaggcg
gccgcggtggcggagcggatcgccaagctgatcgggggtggccacgctgcagccgagatc
gccgtgctcttccggacgaacggccagtcccaggccatcgagtcggccctcgccggctcc
ggcgtgccctacctcgtcaggggaggcgagcggttcttcgctcggagggaggtccgcgac
gccatcctcctgctgcgcggcgcggcgcggagcgacgacgggagcaagcccctcggccac
atcacccgtgacgtgatctcgggcgccggctgggcccccgagccgccgacgagcggtggt
gcgacccgggaacggtgggagtcgctgaacgctctcgccgggttggccgacgacctggct
gcaaccgccccggacgcccggctcccggagctggtcagcgagctcgaccggcgcgcgtcc
gagcagcacgcgccggcggtccaaggcgtcaccctggccagtctccatgccgccaaggga
ctcgagtgggacaccgtcttcctcgtcggcgcctccgacggactgattccgatttccttg
gccgagggagccgacgcggtgaacgaggagcgtcgcctgctctatgtcggcgtcacccga
gcgcggcggcagctgttcctgtcctgggcggcggcgcgcaaccccggcgggcgcccgacc
cgccgggtgtcgcgcttcctcgggccggccgagggcatcctcggaagcggggcccgggcc
gtgacgaccgcccgcgctcggacgcgtgggcccaaggttgccgccgtcgtgacctgccgc
ggttgcggcgtcgtcctcacgagcgccgcgcaccgcaagactgggcggtgcgatgactgc
ccaccgacctacgacgaggccctcttcgagcggctgcgcgcctggcggctcggcgtcgca
cgggaggcaggtgtcccggccttcgtcgtcttcaccgacgcgaccctgacggcgatcgcc
gagcgcgaaccggccgacgagccagcgctgtcgaccatcagcggggtgggcgcgcgcaaa
ctcggacaatacgggtccgacatcctcgctctcctcggtggggcggacccggaagaagtg
ctccagaaccgctctgccgcagccgaactcacggaggcgtag
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