Intrasporangium calvum: Intca_2724
Help
Entry
Intca_2724 CDS
T01385
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ica
Intrasporangium calvum
Pathway
ica03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ica00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Intca_2724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ica03021
]
Intca_2724
03400 DNA repair and recombination proteins [BR:
ica03400
]
Intca_2724
Enzymes [BR:
ica01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Intca_2724
Transcription machinery [BR:
ica03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Intca_2724
DNA repair and recombination proteins [BR:
ica03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Intca_2724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
ADU49225
UniProt:
E6S950
LinkDB
All DBs
Position
complement(3050016..3051041)
Genome browser
AA seq
341 aa
AA seq
DB search
MLIAQRPVLSEEVVADNRSRFTIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTEMILNIKGLVVSSEHDEPVVMYLRKQGPGVVTAGDITPPAGVEVHN
PDLAIATLNDKGKLEMELTVERGRGYVSAQQNKSGDQEIGRIPVDSIYSPVLAVTYKVEA
TRVEQRTDFDKLIVDVETKNSMTPRDAMASSGKTLVELFGLARELNVEAEGIDMGPSPTD
AALAADLALPIEDLDLTVRSYNCLKREGIHTVGELVGRSEADLLDIRNFGAKSIDEVKAK
LVGMGLALKDSPPGFDPSALVDNYGDEDYNDDESFVEDEQL
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
gtgctcatcgcacagcgtcccgtgctctccgaggaagtcgtcgcggacaaccgcagccgc
ttcaccatcgagccgctcgagcccggcttcggctacacgctcggcaacagcctccgtcgc
accctgctctcgagcatccccggtgccgcggtcacgtccatccgcatcgacggcgtgctc
cacgagttcacgaccgtgccgggtgtcaaggaggacgtcaccgagatgatcctcaacatc
aagggcctcgtcgtctcctcggagcacgacgagccggtcgtcatgtacctgcgcaagcag
ggccccggcgtcgtcaccgctggtgacatcaccccgcctgcaggcgtcgaggtgcacaac
cccgacctggcgatcgccaccctgaacgacaagggcaagctcgagatggagctgaccgtc
gagcgcggccgcggctacgtctcggcgcagcagaacaagtccggcgaccaggagatcggc
cgcatcccggtcgactcgatctactcgccggtcctcgcggtgacctacaaggtcgaggcg
acccgtgtcgagcagcgcaccgacttcgacaagctcatcgtcgacgtcgagacgaagaac
tcgatgaccccgcgcgacgcgatggcctcctccggcaagacgctcgtcgagctcttcggc
ctggcgcgcgagctcaacgtcgaggccgagggcatcgacatgggcccgtcgccgaccgac
gccgcgctggctgcggacctcgcgctgccgatcgaggacctcgacctgacggttcgttcc
tacaactgcctcaagcgcgagggaatccacaccgtgggtgagctcgtgggccgcagcgag
gccgacctgctcgacatccgcaacttcggtgcgaagtcgatcgacgaggtcaaggccaag
ctcgtcggcatgggtctggccctcaaggacagcccccccgggttcgacccgtcggccctc
gtggacaactacggcgacgaggactacaacgacgacgagtccttcgtcgaggacgagcag
ctctga
DBGET
integrated database retrieval system
