Intrasporangium calvum: Intca_3171
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Entry
Intca_3171 CDS
T01385
Name
(GenBank) hypothetical protein
KO
K10439
ribose transport system substrate-binding protein
Organism
ica
Intrasporangium calvum
Pathway
ica02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ica00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Intca_3171
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Intca_3171
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ica02000
]
Intca_3171
Transporters [BR:
ica02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Intca_3171
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
B12-binding
Motif
Other DBs
NCBI-ProteinID:
ADU49655
UniProt:
E6SD37
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All DBs
Position
complement(3504650..3505834)
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AA seq
394 aa
AA seq
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MSLSITPSRRVRALAATTLAISLISACGAGERDTAAKPAANPAATGASAAGIEAAKEAMA
GWAKAPEWPDATKIEKPVDLTGKKFTYVALGDQIPVIHGVGVGVQEALGAAGAEVKICDG
KFNPTAVADCLKTAGDEQVDGVISSFIDYQMAGPAFDALAAKGVKVLLGGVAPSGGRQAD
ANLAFYDNTPRVIALYDAMSQAALAEGGPETNVLWVRLLDSSTTTAASDHGVAAFKEACP
SCGLATADFTTANLDKLATSVSAALVSNPDTNAVIVPVDSFVPPVLQSIQAAKFAGKVKI
HSSSSDLAGLQRIKDGQQASDLGTPVLFEGWKFANAMVQLLAGQEVEKGEELVTRAFTKD
NVGSLTLDDKTYLTDDWFGGDAYKQKFLAAWGLK
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgtctctttccatcaccccttcccgtcgagtacgggcgctcgcggcgaccacgctcgcc
atctccctgatcagcgcctgtggcgccggagagcgcgacaccgccgccaagcccgccgcc
aaccccgccgccaccggtgccagcgcagccggcatcgaggcggccaaggaggcgatggcc
ggctgggccaaggcgccggaatggccggacgccacgaagatcgagaagccggtcgacctg
acgggcaagaagttcacctacgtcgccctcggcgaccagatccccgtgatccacggcgtc
ggcgtcggcgtccaggaggccctgggcgcagccggcgcggaggtcaagatctgcgacggc
aagttcaaccccactgccgtcgccgactgcctcaagaccgccggtgacgagcaggtcgac
ggggtgatcagctcgttcatcgactaccagatggcaggccccgccttcgatgccctcgcg
gcgaagggggtcaaggtcctcctcggtggcgtcgcgccgtccggcggacgccaagccgac
gcgaacctcgcgttctacgacaacacgccgcgggtgatcgccctctacgacgcgatgtcg
caggccgcgctcgccgagggtggcccggagacgaacgtcctctgggtccggctgctcgac
tcgagcaccaccaccgcggcgagcgaccacggcgtcgccgcgttcaaggaagcctgcccc
agctgtggtctggccacggctgacttcacgacggccaacctcgacaagctcgcgacgtcg
gtcagcgccgccctggtgtccaaccccgacaccaacgccgtcatcgtgccggtggacagc
ttcgtgccaccggtcctgcagagcatccaggcggcgaagttcgcgggcaaggtcaagatc
cactcgtccagctccgacctcgctggtctccagcggatcaaggacggccagcaggccagc
gacctcggcacccccgtcctcttcgagggctggaagttcgccaacgccatggtccagctc
ctcgcgggccaggaggtcgagaagggtgaggagctggtcacccgggccttcaccaaggac
aacgtcgggtcgctcaccctcgacgacaagacgtacctgaccgacgactggttcggcggg
gacgcctacaagcagaagttcctcgccgcctggggcctcaagtaa
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