Candidatus Ishikawaella capsulata: ICMP_065
Help
Entry
ICMP_065 CDS
T04149
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
icp
Candidatus Ishikawaella capsulata
Brite
KEGG Orthology (KO) [BR:
icp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
icp03032
]
ICMP_065 (gyrA)
03400 DNA repair and recombination proteins [BR:
icp03400
]
ICMP_065 (gyrA)
Enzymes [BR:
icp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ICMP_065 (gyrA)
DNA replication proteins [BR:
icp03032
]
Prokaryotic type
DNA Topoisomerases
ICMP_065 (gyrA)
DNA repair and recombination proteins [BR:
icp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ICMP_065 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
BAH82931
UniProt:
C5WC75
LinkDB
All DBs
Position
76215..78782
Genome browser
AA seq
855 aa
AA seq
DB search
MRYLNNYSMNELKKNTISVNVEEELTNSYLSYAMSVIVSRALPDVRDGLKPVHRRVLFAM
YELSNLYNKPYKKSARIVGDVIGKYHPHGDTAVYDAIVRMAQPFSLRYILIDGQGNFGSI
DGDSAAAMRYTEIRMSKIAHELLTDLEKDTVNFISNYDGSEKIPEVLPSQIPNLLINGSS
GIAVGMATNIPPHNLTEVINACLAYIEDHNITVKKLMEYLPGPDFPTAAIINGQNGVEEA
YRTGRGKIYIRAFVEIAIDNKTKREIIIIHEIPYQVNKARLIERIAELVKDKRVDGISTL
RDESDKDGLRIVLEVKRDAVAQVVLNNLYSLTQLQISFGINMVALHHGQPKTMTLKEILE
AFICHRREIVTRRTVFELHKARERIHVVEGLIIALENLDQIIYFIRNSSSLSEIKIAILT
KKWNLGKLIQITHHSKSFNKNFKYFCEKSHIHDNKYTLTEHQVQAILDMRLQKLTGLEHK
KLIEEYETLVKQINNLTHVLQHPDHLMKIICKDLKIIRNQFGDARRTEININGIDIKNEE
LIHHEDVVVTLSNQGYVKYQPLTDYEAQRRGGKGKSAAQIKEEDFIDSLLVANTHDTILC
FSSKGRLYWMKVYQLPEASRGSRGRPIVNLLPLAEKERITTILPVYKYEEGLNILMATAK
GIVKKTAINEFSRPRNIGIIAIKLHGDDELIGVALTKGNDEIMLFSSAGKVVRFSETTVR
NMGRAASGVCGIKLAKNDLVVSLIVPRKKGEILTVTQNGYGKRTANSEYPTKSRATQGVI
SIKVTKRNGLVIGAIQVVDSDQIIIITNAGTLVRTRVSEVSIVGRNTQGVILIRTAENER
VVGLQRVADTIYRSD
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
ttgaggtacctaaataattactccatgaacgaactcaaaaaaaatactatatcagttaat
gttgaagaagagttaacaaattcttatcttagttatgctatgtcagttattgtttcacgt
gctttacctgatgtacgtgatggactaaagcctgttcatcgtcgagtattatttgcgatg
tatgagttaagcaatttatataataaaccgtataaaaaatctgccaggatagtaggcgat
gtcataggaaaatatcatcctcatggagatacggctgtttatgatgcaatagttcgcatg
gctcaacctttctctttacgttatatattaatagacggacaaggtaattttggttctatt
gacggggactctgctgctgctatgcgttatactgaaatacgcatgtcaaagatagcacat
gaactattaactgacctagaaaaagatacagtaaattttatttctaactatgatggcagt
gaaaaaatccctgaagtattaccaagtcaaattccaaatttgttaattaatggtagttct
ggtattgccgtaggaatggcaactaatattcctcctcataatttaacagaagtaattaac
gcttgtcttgcttatattgaagatcacaatattactgtaaaaaaattaatggaatatctt
cccggtccggactttcccactgcagctataattaatggtcagaatggagttgaagaagcc
tatagaacaggacgtggaaaaatttatattcgtgcttttgttgaaatagcaatcgataat
aaaacaaaacgcgaaattataatcatacatgaaataccttatcaagtaaataaagctcgt
ttgattgaaagaatagcagaattagttaaagataaacgagttgatggtataagtacatta
cgagatgaatcagataaagatggtctaagaattgtacttgaagtaaagcgagatgcagta
gctcaagtagtactcaataacctttattctttaacccaattacaaatttcttttggcatt
aacatggtggctttacatcatggtcaacctaagactatgacattaaaagaaatattagaa
gcttttatatgtcatcgtcgtgaaatagtaacacggcgtactgtttttgaattacataaa
gcacgtgaaagaattcatgttgttgaaggcttaataattgccttggaaaatttagaccaa
atcatttattttattcgtaattcttccagtttatccgaaattaaaatcgctattttaaca
aaaaaatggaatctaggaaaattaattcaaattacacatcattctaaaagttttaataaa
aatttcaagtatttttgtgaaaaatcgcatattcatgataacaaatatactcttacagaa
catcaagtacaagcgattcttgatatgcgtttacaaaaactcactggattagagcataag
aagctaattgaagaatatgaaacattggttaaacaaataaacaatttaacacatgtttta
cagcatccagatcatcttatgaaaataatttgtaaagatttaaaaataataaggaatcaa
tttggtgatgcacgacgtacagaaattaatatcaatggtattgacataaaaaacgaagaa
ctaattcatcatgaagatgtagtagtcaccttatctaatcaaggatatgttaaatatcag
ccattgacagattatgaagcccagcgtagaggtggtaagggaaaatctgctgcacaaatt
aaagaagaggactttattgattctctattagttgcaaatactcatgataccatactatgt
ttttctagtaaaggacgactgtattggatgaaagtttatcagctacctgaagcaagtaga
ggttcacgtggtagacccattgttaatttactacccttagcagaaaaagaacgtattact
actattcttcctgtatataaatatgaagaaggactgaatattcttatggcaactgcaaaa
ggaatcgtcaaaaaaactgccattaacgaatttagtcgtcctcgcaatattggtattatt
gctattaaattacatggggatgatgaattaataggtgttgcgttaactaaaggaaatgat
gaaataatgcttttttcctctgcaggtaaagtggtacgtttttcggagactacggttcgg
aatatgggcagagcagcttcaggggtatgtggtattaaattagccaaaaacgatttagta
gtatctctcatagtacctcgaaaaaaaggtgaaattcttactgtaacacaaaacggatat
ggcaaaagaacagccaacagtgaatatccaactaaatctagagctactcaaggagttatt
tctattaaagttactaaacgtaatggattggttataggagctatacaagtagtagatagc
gatcagataataataattactaatgctggtactttagtgcgtacccgggtatcagaagtc
agtatagtagggcgtaatactcaaggtgtaattctcattcgtactgcagaaaatgaacga
gtagttggattacaacgtgttgcagataccatttatagaagtgattaa
DBGET
integrated database retrieval system
