Candidatus Ishikawaella capsulata: ICMP_097
Help
Entry
ICMP_097 CDS
T04149
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
icp
Candidatus Ishikawaella capsulata
Brite
KEGG Orthology (KO) [BR:
icp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
icp03016
]
ICMP_097 (truA)
Enzymes [BR:
icp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
ICMP_097 (truA)
Transfer RNA biogenesis [BR:
icp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ICMP_097 (truA)
Prokaryotic type
ICMP_097 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DJR-like_dom
DUF2344
Motif
Other DBs
NCBI-ProteinID:
BAH82963
UniProt:
C5WCA7
LinkDB
All DBs
Position
complement(119784..120593)
Genome browser
AA seq
269 aa
AA seq
DB search
MLKSSKFIKWALGVRYDGSKYYGWQKQKALHTIQEYLENALSVVANHEVKVFCAGRTDAG
VHSIGQVVHFETISKRNESAWTRGVNAHLPHDIAVSWVKEVPNCFHARFSALARRYLYII
YNKSLRCPLFNNCMMHFYPYLSEEKMYRAGQYLLGENDFSTFRSSYCQSHTPWRKLIYLK
VKRYGHYITIDMKANSFVHHMVRNIVGSLIEVGCGKHTEKWISELLIAKDRKLAGVKAQA
QGLYLLSVDYPSHFALPYSNNIEPLFLIN
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagagtagtaaatttattaaatgggcactgggtgttagatatgatggcagtaaa
tactatggttggcaaaaacaaaaagcattacacactatacaagaatatttagaaaacgct
ctttctgtagtagcaaatcacgaagtaaaagttttttgtgctgggcgtactgacgcaggt
gttcacagcatagggcaagtggttcattttgaaactatatccaaaagaaatgaatctgct
tggactaggggtgtaaatgctcatttaccccatgatattgcggtgagttgggtaaaagaa
gtacccaattgttttcacgctcgttttagtgctcttgcacgtcgttatctttacataata
tataataaatcattaagatgtcccctctttaacaactgcatgatgcatttttatccttat
ttaagtgaagagaaaatgtaccgagcaggacagtatctattaggagaaaatgatttttct
acatttcgttcctcgtattgtcaatctcataccccatggcgtaaattaatatatcttaag
gttaaacgttatggacattatataacaattgatatgaaagcaaattcttttgttcatcac
atggttcgtaatattgttggtagcctaatagaggtaggttgtggcaaacatactgaaaag
tggatatcagaattattaatcgcaaaagatcgtaaattagctggtgttaaggctcaagct
caaggtctttacttgctatccgtagactatccttctcattttgcattaccatattctaat
aatatagaaccattatttttaattaattaa
DBGET
integrated database retrieval system
