Candidatus Ishikawaella capsulata: ICMP_182
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Entry
ICMP_182 CDS
T04149
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
icp
Candidatus Ishikawaella capsulata
Pathway
icp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
icp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
ICMP_182 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
icp03019
]
ICMP_182 (orn)
03009 Ribosome biogenesis [BR:
icp03009
]
ICMP_182 (orn)
Messenger RNA biogenesis [BR:
icp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ICMP_182 (orn)
Ribosome biogenesis [BR:
icp03009
]
Eukaryotic type
Pre-60S particles
RNases
ICMP_182 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
KH_TffA
Motif
Other DBs
NCBI-ProteinID:
BAH83042
UniProt:
C5WCI6
LinkDB
All DBs
Position
complement(217847..218380)
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AA seq
177 aa
AA seq
DB search
MNNLIWIDLEMTGLDPEKHHIIEIATLITDINLNIIAEGPNIAIYQPDSHLISMDNWNLV
THNNSKLLDRVNISIYDYNSAELATINFLKEWVPANVSPMCGNSVAQDRRFLFKYMPKLE
KYFHYRYLDVSTLKELARLWQPKLLQKVKKSNTHQAMIDIRQSVAELACYRKHFLKL
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatttaatttggatagatttggaaatgactggactagatccagaaaaacaccat
attattgaaattgcaacattaattactgatattaacttaaatatcatagcagaaggccca
aatatagcaatatatcagcctgatagtcatttaatatcaatggataactggaatttagta
actcataataatagtaaattactagaccgtgtaaatattagtatatatgattataattct
gctgaattagcaaccattaattttttaaaagaatgggtacccgcaaatgtttctcctatg
tgcggaaatagtgtagctcaagatagacgatttctttttaagtatatgcctaagttagaa
aaatattttcattatcgttacttagacgttagtactttaaaagaattagctcgtttatgg
caaccaaaacttttgcaaaaagtaaaaaaatcaaatacacatcaagcaatgatagatatt
cgtcaatcagtagcagaactcgcttgttatcgtaaacattttttaaaactataa
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