Candidatus Ishikawaella capsulata: ICMP_229
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Entry
ICMP_229 CDS
T04149
Symbol
ruvA
Name
(GenBank) Holliday junction DNA helicase motor protein
KO
K03550
holliday junction DNA helicase RuvA
Organism
icp
Candidatus Ishikawaella capsulata
Pathway
icp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
icp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ICMP_229 (ruvA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
icp03400
]
ICMP_229 (ruvA)
DNA repair and recombination proteins [BR:
icp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ICMP_229 (ruvA)
RecFOR pathway proteins
ICMP_229 (ruvA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
Transposase_20
HHH_3
HHH_8
IMS_HHH
RecR_HhH
PyrI
Motif
Other DBs
NCBI-ProteinID:
BAH83089
UniProt:
C5WCN3
LinkDB
All DBs
Position
complement(278503..279117)
Genome browser
AA seq
204 aa
AA seq
DB search
MISFLRGNIIEKKAPWVLLEVNGIGYEINMPITCFNDLPDLNQETLIFTHFIIREDLICI
FGFQTIAKRTLFRNLIKINGVGCKLALIILSNISPQQFINVIEERKVSLLEKIPGIGKKI
AERILIEMRDLFKKKSDNLSTSILEKKAIADDAIKALIALGYKPKEAHFIITKVHNPNMD
CKTLICAALKKIYEVKNEKKGLFY
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgataagttttttacgcggtaatattatagaaaaaaaggctccttgggtattgcttgaa
gttaatggtatagggtatgaaataaatatgccaattacttgttttaatgatctacctgat
ctaaatcaagaaacacttatttttactcattttattataagagaagatttaatatgtatt
tttggttttcaaacaatagcaaaacgtacgttatttcgtaatttaataaaaattaatggt
gtgggatgcaaactagcacttattatactttctaatatatcaccacaacaatttattaat
gttattgaagaaagaaaagtatctttgctagagaagattccaggtataggaaaaaaaata
gctgaaagaattctcatagaaatgagagatttatttaagaaaaaaagtgataatttatct
acttctattctagaaaaaaaagcaattgcagatgatgctattaaagctctgatagcttta
ggttacaagccaaaggaagctcattttataattaccaaagtacataatcctaatatggac
tgtaaaactttgatttgtgccgctttaaaaaaaatatatgaggttaaaaatgaaaaaaaa
ggattgttttattaa
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