Candidatus Ishikawaella capsulata: ICMP_294
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Entry
ICMP_294 CDS
T04149
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
icp
Candidatus Ishikawaella capsulata
Brite
KEGG Orthology (KO) [BR:
icp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
icp03016
]
ICMP_294 (truB)
Enzymes [BR:
icp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ICMP_294 (truB)
Transfer RNA biogenesis [BR:
icp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ICMP_294 (truB)
Prokaryotic type
ICMP_294 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
BAH83149
UniProt:
C5WCU3
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All DBs
Position
334043..334993
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AA seq
316 aa
AA seq
DB search
MIFVPHNYKRDVHGILLVDKHQGPSSNTILQDVKKIYYANKAGHTGTLDPIATGMLPICF
GEATKFAQYLLNAKKNYHVVARLGENTTTADSYGSIIQKRPITFTQVHLNGALEKFRGDF
LQTPPMFSAVKYHGKQLYKYAKKGINIQRKPRLITVHNLHLIEWRNEELELEICCSKGTY
IRTIIDSLGEILGCGAHVIKLHRLQVGHYPVNSMVSLCHLHQIIQSAIKQNISPLKLLDL
LLLPIDSTLIELPIINLSSDTASRFKKGQTVKVKNFLYEGIVKVTEGKDNIFIGIALFNN
FYLAPHRLVSQSIVVK
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgatttttgttcctcataattataaaagagatgtacatggaatacttcttgttgataaa
catcaagggccttcttctaataccatactacaagatgtgaaaaaaatttattatgcaaat
aaagctgggcatactggtacattagatccaatagcaactggtatgttgcctatttgcttt
ggagaagccactaaatttgctcaatatttgttaaatgcaaaaaaaaattatcatgtagtt
gcaagattaggagaaaatactactactgctgattcttacggtagcatcattcaaaaacgt
cctattacatttactcaagtacatctcaatggagcattagaaaaatttagaggagatttt
ttacagacacctccaatgttttcagctgtaaaatatcatggtaaacagctctataagtat
gcaaaaaaaggaattaatatacaacgcaaacctcgtctaattactgtgcataatttacat
ctcattgaatggagaaatgaagaattagaattagaaatttgctgttctaaaggtacatat
attcgtactattattgatagtttaggagaaatattaggatgtggagctcatgtaattaaa
ttacaccgtttgcaagtaggtcattatcctgttaatagtatggtatcattatgtcattta
catcagattatacaatctgctataaaacagaatatttctcctctcaaattattagattta
ctcttattaccaatagatagtactttaatagagttaccaattattaatttatcctcggat
acagcatctcgttttaaaaaaggacaaacagtgaaagtaaaaaattttttatatgaaggc
atagtgaaggtcactgaaggtaaagataatatctttattggtatagcattatttaataat
ttttacttagcacctcatcgtctagtatctcaatctattgttgtaaaataa
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