Candidatus Ishikawaella capsulata: ICMP_382
Help
Entry
ICMP_382 CDS
T04149
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
icp
Candidatus Ishikawaella capsulata
Pathway
icp00260
Glycine, serine and threonine metabolism
icp00630
Glyoxylate and dicarboxylate metabolism
icp00670
One carbon pool by folate
icp00680
Methane metabolism
icp01100
Metabolic pathways
icp01110
Biosynthesis of secondary metabolites
icp01120
Microbial metabolism in diverse environments
icp01200
Carbon metabolism
icp01230
Biosynthesis of amino acids
icp01240
Biosynthesis of cofactors
icp04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
icp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
ICMP_382 (glyA)
09102 Energy metabolism
00680 Methane metabolism
ICMP_382 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
ICMP_382 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
ICMP_382 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
ICMP_382 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
ICMP_382 (glyA)
Enzymes [BR:
icp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
ICMP_382 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
BAH83235
UniProt:
C5WD29
LinkDB
All DBs
Position
complement(442544..443797)
Genome browser
AA seq
417 aa
AA seq
DB search
MLKSPMNIADYDVELWKHMQQENTRQEEHIELIASENYTSKRVMEAQGSQLTNKYAEGYP
GKRYYGGCEHVDAIEKLAIERAKKIFGADYANVQPHSGSQANYAVYSSLLKPGNTIMGMD
LAHGGHLTHGSSVNFSGKLYKVVSYGVDDSGEIDYYNIEKLAKKYKPKIIVGGFSAYSGI
CDWAKMRYIADSINSYLFVDMAHVAGLVAAGIYPNPVPYAHVVSSTTHKTLAGPRGGLIL
AKGGDISFYEKLNSAVFPGNQGGPLMHIIAGKAVAFKEAMEPTFKIYQEQVVKNAQVMVS
YLMERGYQIISGKTANHLFLVNLQNKKLTGKLASYRLGRANITVNKNSVPNDNKGPFITS
GIRIGTAAITRRGLKEKESINIAEWIADILDDIENNNTIEIIKKKVIKMCMQFPVYL
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
gtgctgaaatccccaatgaatattgctgattatgacgtagaattatggaaacatatgcaa
caggaaaatacacgtcaagaagaacatattgaactcattgcatcagaaaattatacaagt
aagcgtgttatggaagcacagggttcacaacttactaataaatatgctgaaggttatcct
ggaaaacgttactatggaggctgtgaacatgtagatgctattgaaaaattggcaattgaa
cgtgcaaaaaaaatatttggagctgattatgctaatgtacaaccacattcaggttcccag
gcaaattatgcggtttatagtagtttattaaaaccagggaatactattatgggtatggat
ttagcgcatggcggacatttgactcatggatcatcagtgaatttttctggtaaattatat
aaggttgtatcttatggagtagatgatagcggagaaatagattattataatatagaaaaa
ttagcaaaaaaatataaacctaaaattattgttggggggttttctgcttattctggaatt
tgtgactgggctaaaatgcgttatatcgcagatagcataaattcttatttatttgttgat
atggctcatgtagctggattagttgcagcaggtatttaccccaatcctgtaccttatgca
catgtagtttcttctactactcataaaacacttgctggtccacgtggcggattaatatta
gctaaaggtggtgatatttcattttatgaaaaattaaattctgctgtgtttccaggcaat
caaggcgggccacttatgcacataattgctggcaaagcagtggcatttaaagaggcaatg
gaaccaacattcaaaatatatcaggaacaagtagttaaaaatgctcaagttatggttagt
tacttaatggagcgtggatatcagataatatcgggaaaaactgctaatcatcttttttta
gtaaatttacaaaacaagaaattaaccggtaaattagctagttatcgcttaggacgtgct
aatataactgttaacaaaaatagtgtacccaatgataacaaaggtccttttattacttca
ggcattagaataggaacagcagctattacacgtcgaggtttaaaggaaaaagagtccatt
aatatagcggaatggatagctgatatcttagatgatattgagaataataatactattgaa
attattaagaaaaaagttataaagatgtgtatgcagttcccagtttatctttaa
DBGET
integrated database retrieval system