Candidatus Ishikawaella capsulata: ICMP_393
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Entry
ICMP_393 CDS
T04149
Symbol
ddlB
Name
(GenBank) D-alanylalanine synthetase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
icp
Candidatus Ishikawaella capsulata
Pathway
icp00470
D-Amino acid metabolism
icp00550
Peptidoglycan biosynthesis
icp01100
Metabolic pathways
icp01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
icp00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ICMP_393 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ICMP_393 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
ICMP_393 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
icp01011
]
ICMP_393 (ddlB)
Enzymes [BR:
icp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
ICMP_393 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
icp01011
]
Precursor biosynthesis
Amino acid ligase
ICMP_393 (ddlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
ATP-grasp_3
CPSase_L_D2
TTL
ATP-grasp
ATPgrasp_YheCD
Motif
Other DBs
NCBI-ProteinID:
BAH83246
UniProt:
C5WD40
LinkDB
All DBs
Position
complement(457852..458781)
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AA seq
309 aa
AA seq
DB search
MAEKIAVLMGGTSNERNISLMSGKTVLQSMREIGINAYPIDTKNYPVIDLKKDGFDKAFI
ALHGGKGEDGHLQAILDFINIKHTGNSVITSAITMDKIRTKLLWQGSKLPTSNFIKINRE
NIKKCLDPDIQEAITALNLPLFVKPNCSGSSIGISKINNLKKLYSAVKKASYHDEEVLIE
TFLSGPEYTVGIIGEKILPSVRIQANKEFYNYEAKYITNDTQYFCPSGLTNNREQELQSL
AYSAWKILGGNKWGRVDVMMDEEDKFHLLEVNTSPGMTYQSLIPRAAKQLGWSFSDLIMY
ILQLADNIV
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaaagattgcagtattgatgggaggtacttctaatgagagaaatatttccttg
atgtcaggtaaaactgtattacaaagtatgcgtgaaataggtattaacgcataccccata
gatactaaaaattatcctgtaatagatctaaaaaaagatggttttgataaagcttttatc
gcactacacggaggtaagggtgaagatggtcatttacaggctattttagattttattaat
atcaagcatactggtaacagtgtaattacttcggcaattactatggataaaataagaact
aagctattgtggcaaggcagcaaattaccaactagtaattttattaagattaatcgagaa
aatattaaaaaatgtttagaccctgacatacaggaagcaattactgcgttaaatctacca
ttattcgttaaacctaattgttcaggttctagtataggaattagtaaaataaataactta
aaaaagttatattcagctgtaaaaaaagcatcttatcatgatgaagaggttttaattgaa
acttttcttagtggtccagaatacaccgtaggtattattggagaaaaaatattgccatca
gtacgtattcaagcaaataaagaattctataattatgaagctaaatatattactaatgat
actcagtatttttgtcctagtggtttgactaataatagggaacaagaattacaatcatta
gcatattctgcctggaaaatattaggtggtaacaaatggggacgagtggatgttatgatg
gatgaagaagataaatttcacctactagaagttaatacatctccggggatgacttatcaa
agtttaatacctagagcagcgaaacaactcggttggagtttttcagacctcataatgtat
attttacaacttgctgataatattgtataa
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