Candidatus Ishikawaella capsulata: ICMP_500
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Entry
ICMP_500 CDS
T04149
Symbol
miaB
Name
(GenBank) isopentenyl-adenosine A37 tRNA methylthiolase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
icp
Candidatus Ishikawaella capsulata
Brite
KEGG Orthology (KO) [BR:
icp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
icp03016
]
ICMP_500 (miaB)
Enzymes [BR:
icp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
ICMP_500 (miaB)
Transfer RNA biogenesis [BR:
icp03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
ICMP_500 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
L27_N
Amdase
Motif
Other DBs
NCBI-ProteinID:
BAH83347
UniProt:
C5WDE1
LinkDB
All DBs
Position
565745..567079
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AA seq
444 aa
AA seq
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MSYMKRIYIKTWGCQMNEYDSSKIADILIKNHNYILTDDVKKADVLILNTCSIREKAQEK
VFHQLGRWRTLKENNPDLIIGVGGCVASQEGHQILQRAKYVDIIFGPQTFHRLPHMIDQV
YQNKNSVIDISFPKVEKFDFVPEPHSISPTSYVSIMEGCNKYCTYCVVPYTRGEEVSRPC
DDILYEIAQLAEQGVREVNLLGQNVNAYRGLTFDGKICKFAELLRLVAAIDGIDRIRFTT
SHPIEFTDDIIDVYTDTPELVSFLHLPVQSGSNRILKLMNRPYTILDYKKIVDKLKLARP
DIQISSDFIIGFPSESQDDFDLTVQLITDVNFDMSFSFIYSPRPGTPAAYLYDNTSQEEK
KQRLYTVQEHINKQSMEWSKSMIGSIQKVLVEGISKKNIMNLRGRTENNRVVDFEGLPYM
IGQFIDIKIINAHFNSLQGMIEKI
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
ttgagttatatgaaaagaatatatattaaaacttggggatgccagatgaatgaatatgac
tcctccaagatagccgatatactaataaaaaatcataactacatactgactgacgatgtg
aaaaaagcagatgttttaatactgaatacttgttctattcgtgaaaaagctcaagagaaa
gtatttcatcagttaggacgttggagaactttaaaagaaaataaccctgacttaattatt
ggggtaggaggttgtgtcgcatctcaggaaggtcatcagattcttcagcgagctaaatat
gttgatattatatttgggcctcaaactttccatcgcttacctcatatgattgatcaggta
tatcaaaataaaaattcagtgatagatatcagttttccaaaggttgaaaaattcgatttt
gtaccggaaccacatagcataagtcctacatcttatgtatctatcatggaaggatgtaat
aaatactgtacctattgtgtagtaccctatacaagaggagaggaagttagcagaccatgt
gatgatatattatatgaaattgctcaacttgctgaacaaggtgtacgtgaagtaaattta
ttaggtcaaaacgttaatgcttatagaggattaacatttgatggaaaaatatgtaaattt
gctgaactattacgattagtagcagcaatagatggaattgataggattcgatttactaca
agtcatccgattgaatttaccgatgatattattgatgtttatactgatacgccagagtta
gtcagttttttacatcttccagtacaaagtggttctaatcgtattttaaaattaatgaat
cgtccttatactatactcgattacaaaaaaattgtcgacaagctaaaattagcacgtcct
gatattcagataagttcagattttatcataggatttcctagcgaaagtcaagatgatttt
gatctcacagtacaattgattactgatgttaattttgatatgagttttagttttatttat
tctcctcgaccaggaactcctgctgcttatttatatgataatacttcgcaagaagaaaaa
aaacaacgtctttacactgtacaagaacatattaacaaacagtcaatggaatggagtaaa
agtatgataggaagtatacaaaaagttcttgtagaaggcatttcaaaaaaaaatatcatg
aatctgcgggggcgcactgaaaataatagagtagtagattttgaaggccttccatatatg
ataggtcaatttattgatataaaaatcataaatgcacattttaattcgttacaaggaatg
atcgaaaaaatataa
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