Ideonella dechloratans: LRM40_00280
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Entry
LRM40_00280 CDS
T07737
Name
(GenBank) form I ribulose bisphosphate carboxylase large subunit
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
idc
Ideonella dechloratans
Pathway
idc00630
Glyoxylate and dicarboxylate metabolism
idc00710
Carbon fixation by Calvin cycle
idc01100
Metabolic pathways
idc01110
Biosynthesis of secondary metabolites
idc01120
Microbial metabolism in diverse environments
idc01200
Carbon metabolism
Module
idc_M00165
Reductive pentose phosphate cycle (Calvin cycle)
Brite
KEGG Orthology (KO) [BR:
idc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LRM40_00280
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
LRM40_00280
Enzymes [BR:
idc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
LRM40_00280
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Paralog
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Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
UFU10193
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Position
complement(59676..61142)
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AA seq
488 aa
AA seq
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MNQAVETGVIQDAKKRYSAGVLKYRQMGYWDPDYQPKDTDTLCLFRITPQEGVDPVEAAA
AVAGESSTATWTVVWTDRLTACDSYRAKAYKVEPVPGTPGQYFAWVAYDIILFEEGSIAN
ITASLIGNVFSFKPLKAARLEDIRMPVALVKTFKGPPTGLVVERERLDKFGRPLLGATTK
PKLGLSGRNYGRVIYEGLKGGLDFMKDDENINSQPFMHWRDRFLYVMDAVNKASAATGEV
KGSYLNVTGATMEDIYERAEFAKELGSVVIMVDLIIGWSAIQSIANWARKHDMIVHMHRA
GHGTYTRQKNHGVSFRVMAKWLRLAGVDHLHTGTAVGKLEGDPMTVQGYYNVCRDSFTKQ
DLPRGLFFDQDWADMKKVMPVASGGIHAGQMHQLLNLFGDDVILQFGGGTIGHPAGIQAG
AVANRVALECMVKARNEGRDIAAEGPEILRAAAQFCTPLKQALDTWGEISFNYASTDTSD
FALTPAVA
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagccgtcgagaccggcgtgatccaggatgccaagaagcgctacagcgccggc
gtgctcaagtaccgccagatgggctattgggacccggattaccagcccaaggacaccgac
accctgtgtctgttccgcatcaccccgcaggagggggtggacccggtggaggccgccgcc
gcggtggccggggagagcagcaccgccacctggacggtggtctggaccgaccgcctgacc
gcctgcgacagctaccgcgccaaggcctacaaggtcgagccggtgcccggcaccccgggc
cagtacttcgcctgggtggcctacgacatcatcctgttcgaggagggctcgatcgccaac
atcaccgccagcctgatcggcaatgtcttcagcttcaagccgctgaaggccgcgcggctg
gaggacatccgcatgccggtggccctggtcaagaccttcaagggcccgcccaccggcctg
gtggtcgagcgcgagcgcctggacaagtttggccgcccgctgctgggcgccaccaccaag
cccaagctgggcctgtccgggcgcaactacggccgggtgatctacgagggcctcaagggt
ggcctggacttcatgaaggacgacgagaacatcaactcgcagcccttcatgcactggcgt
gaccgcttcctgtacgtgatggacgcggtcaacaaggccagcgccgccaccggcgaggtc
aagggcagctacctgaacgtgaccggcgcgacgatggaggacatctatgagcgtgccgag
ttcgccaaggagctgggctcggtggtcatcatggtggacctgatcatcggctggagcgcc
atccagtccatcgccaactgggcccgcaagcacgacatgatcgtgcacatgcaccgggcc
ggccacggcacctacacccgccagaagaaccacggcgtgagcttccgcgtgatggccaag
tggctgcgcctggctggcgtggaccacctgcacaccggcaccgcggtgggcaagctcgag
ggcgacccgatgacggtgcagggctactacaacgtctgccgcgacagcttcacgaagcag
gacctgccgcgcggtctgttcttcgaccaggactgggccgacatgaagaaggtgatgccg
gtggcctccggcggcatccacgccggccagatgcaccagctgctgaacctgttcggcgac
gacgtgatcctgcagttcggtggcggcaccatcggccacccggcgggcatccaggccggc
gcggtggccaaccgggtggcgctggagtgcatggtcaaggcccgcaacgagggccgtgac
atcgcggccgagggcccggagatcctgcgcgcggcggcccagttctgcaccccgctgaaa
caggccctggatacctggggcgagatcagcttcaactacgccagcaccgacaccagcgac
ttcgcgctgacgccggccgtcgcctga
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