Ideonella dechloratans: LRM40_00485
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Entry
LRM40_00485 CDS
T07737
Name
(GenBank) DctP family TRAP transporter solute-binding subunit
KO
K11688
TRAP-type transport system periplasmic protein
Organism
idc
Ideonella dechloratans
Pathway
idc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
idc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LRM40_00485
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
idc02000
]
LRM40_00485
Transporters [BR:
idc02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LRM40_00485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Motif
Other DBs
NCBI-ProteinID:
UFU10232
LinkDB
All DBs
Position
complement(101764..102786)
Genome browser
AA seq
340 aa
AA seq
DB search
MSSITRRTALAAGASLLAPAWAQTASPTPAKPLVIKFSHVVAPETPKGKGALRFKELMEI
RSGGRVKVEVYPNSTLFKDKDEIAALKRGEVQLLAPSLSKLRPLGVKEFEVFDLPFLFKN
RNAFTDTAQSYGRTLFTKLEPSGVRGLAFWDNGFLLMSANRRLRDVDDFKGLKMRIQPSA
VAEAEMHALGAEPRVMNFSELFTGLQAGSVDGTEGTASNFLTQRLPEVQKHLTLSNHGYL
AYALLVNRAFHDSLPADLRAVFDSAVADATQYANAIANTENAWALGKIKTSARVALYAPL
AAELDEWRRALMGVHQDVATRVGAAALQAAYQAAGFVPPR
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgatcacccgccgcaccgcactggccgccggggccagcctgctcgcgcccgcc
tgggcccagaccgcatcgcccaccccggccaagccgctggtcatcaagttcagccatgtg
gtggcgcccgaaacccccaagggcaagggcgcgctgcgcttcaaggagctgatggaaatc
cgcagcggcggccgcgtcaaggtggaggtctatcccaacagcacgctgttcaaggacaag
gacgagatcgccgccctcaaacgcggcgaggtgcagctgctcgcgccctcgctgtccaag
ctgcggcccttgggggtcaaggagttcgaggtcttcgacctgcccttcctgttcaagaac
cgcaacgccttcaccgacaccgcccagagctacggccgcaccctgttcaccaagctcgaa
cccagcggcgtgcggggcctggccttctgggacaacggcttcctgctgatgagcgccaac
cgccggctgcgcgatgtggacgacttcaagggactgaagatgcgcatccagccctcggcc
gtggccgaagccgagatgcacgccctgggcgccgagccgcgggtgatgaacttctccgaa
ctcttcaccggcctgcaggccggcagcgtggacggcaccgaaggcacggcctccaacttc
ctgacccagcgcctgcccgaggtgcagaagcacctcaccctgtccaaccacggctacctg
gcttacgccctgctggtcaaccgcgccttccacgacagcctgccggcggacctgcgtgcc
gtgttcgacagcgccgtcgcggacgccacgcagtacgccaacgccatcgccaacaccgag
aacgcctgggccctgggcaagatcaagaccagcgcgcgggtggccctctacgcgccgctg
gccgccgaactggacgaatggcgccgggccctgatgggcgtgcatcaggacgtggcgacc
cgggtgggcgcggccgcgctgcaggccgcctaccaggccgccggcttcgtcccgccgcgc
tga
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