Ideonella dechloratans: LRM40_01275
Help
Entry
LRM40_01275 CDS
T07737
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
idc
Ideonella dechloratans
Pathway
idc00061
Fatty acid biosynthesis
idc00071
Fatty acid degradation
idc01100
Metabolic pathways
idc01212
Fatty acid metabolism
idc02024
Quorum sensing
idc04146
Peroxisome
Module
idc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
idc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LRM40_01275
00071 Fatty acid degradation
LRM40_01275
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LRM40_01275
09145 Cellular community - prokaryotes
02024 Quorum sensing
LRM40_01275
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
idc01004
]
LRM40_01275
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
idc04147
]
LRM40_01275
Enzymes [BR:
idc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LRM40_01275
Lipid biosynthesis proteins [BR:
idc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LRM40_01275
Exosome [BR:
idc04147
]
Exosomal proteins
Exosomal proteins of breast milk
LRM40_01275
Exosomal proteins of breast cancer cells
LRM40_01275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
UFU10382
LinkDB
All DBs
Position
complement(265879..267720)
Genome browser
AA seq
613 aa
AA seq
DB search
MSPSSASAPVTDAPTLPALLKARVALSPQGEAYRAFDPASQRWESLSWAQAGERVARWRD
ALAAMPLPEGGRVAILLPNGLNAMSIDQAAMALGLVPVPLHAIDNPGSIGYILADSAASL
LVLETRHQWEAILHTGAILPALKAVVVTGDLTASPEDLSRLPSAQVPVLGLAEWLAAGVP
SADRPGPGPEDLAAIVYTSGTTGRPKGVKLSHRNVVANLTAVLQCVAPTPQDRFLSFLPL
SHTFERTVGYYLPIATGSCVAYARSVAELPQDMLVQRPTVLVSVPRIYERVYAKLQEVMA
ASPLKARLMDWTIAVGWRRFRARQELPPDADGAPRLLDALVWPLLSLLVARPVLARFGGR
IRVAVSGGAALPAAVARTFLGLGLPIIQGYGMTETSPIVSANTLDSNDPMSVGRPLPGVM
VRIGENRELQVKGPSVMQGYWHRDEDTARVLTPDGWLGTGDQAEILDGRIYIRGRIKDII
VTSTGEKIPPVDLEQALCEDPLIAQCCVVGENKPFIGALVVLHEDEWRRLAFSLGLDWQD
PASLRSSLAHEAVLKRLAQRAAGFPRYAVPRAVVLSLEPWTVENTLLTPTLKLKRHNLMA
RFENELQALYGPR
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgagtccttcttccgcctctgccccggtcaccgacgctcccacccttccggccctgctg
aaggcccgcgtggccctgtcgccgcagggcgaggcctaccgggccttcgatccggccagc
cagcgctgggagtccctgagctgggcccaggccggcgagcgggtggcccgctggcgcgat
gccctggccgccatgcccctgcccgaaggcgggcgggtggccatcctgctgcccaacggc
ctgaacgcgatgagcatcgaccaggccgcaatggccctgggcctggtgccggtgccgctg
cacgccatcgacaacccgggcagcatcggctacatcctggccgacagcgcggcctcgctg
ctggtgctggagacccgccaccagtgggaagccatcctgcacaccggcgccatcctgccg
gccctcaaggcggtcgtcgtcaccggcgacctgaccgccagcccggaggacctctcccgc
ctgccctcggcccaggtgccggtgctgggcctggccgaatggctggccgcgggcgtgccc
tcggccgaccggcccgggccgggcccggaagacctggccgccatcgtctacacctccggc
accaccggccggcccaagggcgtcaagctcagccaccgcaacgtggtggccaacctgacg
gcggtgctgcagtgcgtggccccgacgccgcaggaccgcttcctgtccttcctgccgctg
tcgcacaccttcgagcgcacggtgggctactacctgcccatcgccaccggcagctgcgtg
gcctatgcccgctcggtggccgagttgccgcaggacatgctggtccagcggcccaccgtg
ctggtgtcggtgccgcgcatctacgagcgcgtgtacgccaagctgcaggaggtgatggcg
gcctcgccgctcaaggcccggctgatggactggaccatcgcggtgggctggcggcgcttc
cgggcccgccaggagctgccgcccgacgccgacggcgcgccgcgcctgctggacgccctg
gtctggccgctgctgtcgctgctggtggcacggccggtgctggcccgcttcggcggccgc
atccgggtggcggtcagcggcggcgcggccctgccggcggccgtggcccgcactttcctg
ggcctgggcctgcccatcatccagggctatggcatgaccgagacctcgcccatcgtctcg
gccaacacgctggacagcaacgacccgatgagcgtgggccgcccgctgccgggcgtgatg
gtgcgcatcggcgagaaccgcgagctgcaggtcaagggtccctcggtgatgcagggctac
tggcaccgcgacgaggacaccgcccgggtgctgacgcccgacggctggctgggcaccggc
gaccaggccgagatcctggacgggcgcatctacatccgcggccgcatcaaggacatcatc
gtcacctccaccggcgagaagatcccgccggtcgacctggaacaggccctgtgcgaggac
ccgctgatcgcccagtgctgcgtggtgggcgaaaacaagcccttcatcggcgcgctggtg
gtgctgcacgaggacgaatggcgccgcctggccttcagcctgggcctggactggcaggac
ccggccagcctgcgcagcagcctggcccacgaggcggtgctcaagcggctggcccagcgg
gctgcgggcttcccgcgctacgcggtgccgcgggcggtggtgctgagcctggaaccctgg
acggtcgagaacaccctgctcaccccgacgctcaagctcaagcgccacaacctgatggcc
cgcttcgagaacgagctgcaggccctctatggcccgcgctga
DBGET
integrated database retrieval system
