Ideonella dechloratans: LRM40_02160
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Entry
LRM40_02160 CDS
T07737
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
idc
Ideonella dechloratans
Pathway
idc00521
Streptomycin biosynthesis
idc00523
Polyketide sugar unit biosynthesis
idc00541
Biosynthesis of various nucleotide sugars
idc01100
Metabolic pathways
idc01110
Biosynthesis of secondary metabolites
idc01250
Biosynthesis of nucleotide sugars
Module
idc_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
idc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LRM40_02160 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LRM40_02160 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LRM40_02160 (rfbC)
Enzymes [BR:
idc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LRM40_02160 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UFU10539
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Position
460883..461422
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AA seq
179 aa
AA seq
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MKAIQTDIEDVLILEPRVFGDARGFFMESFNAKTFNELVGHEVNFVQDNHSRSAKGVLRG
LHFQKAPHAQGKLVRVTAGAVFDVAVDIRKDSPSFGRWVGVELSADNHRQFWIPPGLAHG
FLVLSESADFLYKTTDYYAPQAEGALRWDDPDLAIAWPDIGMAPQLSAKDAVAGFLRDL
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgatccagacggacatcgaggacgtgctgatcctcgaaccccgggtcttcggc
gacgcgcgcggcttcttcatggaaagcttcaacgccaagaccttcaacgagctggtgggc
cacgaggtgaacttcgtgcaggacaaccactcgcgctcggccaagggcgtgctgcgcggg
ctgcacttccagaaggccccgcatgcccagggcaagctggtgcgggtgacggctggggcg
gtgttcgacgtggcggtggacatccgaaaggacagccccagcttcggccgctgggtgggg
gtggagctgagcgcggacaaccaccgccagttctggatcccgccggggctggcgcacggc
tttctggtgctcagcgagagcgcggacttcctctacaagaccaccgactactacgcgccg
caggccgaaggcgcgctgcgctgggacgacccggacctggccatcgcctggcccgacatc
ggcatggccccgcagctctcggccaaggacgccgtcgccggcttcctgcgcgatctttga
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