Ideonella dechloratans: LRM40_02165
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Entry
LRM40_02165 CDS
T07737
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
idc
Ideonella dechloratans
Pathway
idc00521
Streptomycin biosynthesis
idc00523
Polyketide sugar unit biosynthesis
idc00525
Acarbose and validamycin biosynthesis
idc00541
Biosynthesis of various nucleotide sugars
idc01100
Metabolic pathways
idc01110
Biosynthesis of secondary metabolites
idc01250
Biosynthesis of nucleotide sugars
Module
idc_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
idc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LRM40_02165 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LRM40_02165 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
LRM40_02165 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LRM40_02165 (rfbB)
00525 Acarbose and validamycin biosynthesis
LRM40_02165 (rfbB)
Enzymes [BR:
idc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
LRM40_02165 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
3Beta_HSD
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
UFU10540
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All DBs
Position
461444..462508
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AA seq
354 aa
AA seq
DB search
MTILVTGGAGFIGSNFVLDWLADPAAEPVVNLDALTYAGNRANLASLDGDARHHFVHGDI
GDRALVDQLLASHRPRAIVHFAAESHVDRSIHGPGAFMKTNVEGTFTLLEAARAYWGTLE
GEAKAAFRFHHVSTDEVYGSLKPSDPPFAETHPYEPNSPYSASKAASDHLVRAWHHTYGL
PVLTTNCSNNYGPYHFPEKLIPLMIVNALAGKPLPVYGDGQQIRDWLYVKDHCSGIRAVL
AGGRLGETYNIGGWNEKANLDIVQTVCALLDELRPDPAGPYSRLITYVTDRPGHDRRYAI
DARKIERELGWRPAETFETGIRKTVQWYLDHPDWVADVQSGAYQAWVGTHYGAR
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaccattctcgtgaccggcggcgccggcttcatcggcagcaacttcgtgctggactgg
ctggcggaccccgcggccgagccggtggtgaacctggacgcgctgacctacgccggcaac
cgcgccaacctggcttcgctggatggcgacgcccgccaccacttcgtgcacggcgacatc
ggcgaccgcgccctggtggaccagctgctggccagccaccgcccgcgcgccatcgtgcac
ttcgccgccgaaagccatgtggaccgctccatccacggccccggcgccttcatgaagacc
aatgtcgaaggcaccttcacgctgctggaggccgcgcgggcctactggggcacgctcgaa
ggcgaggccaaggccgccttccgcttccaccacgtcagcaccgacgaggtctacggcagc
ctgaagcccagcgacccgccctttgccgagacccacccctacgagcccaacagcccctac
agcgccagcaaggccgccagcgaccacctggtgcgcgcctggcaccacacctacggcctg
ccggtgctcaccaccaactgcagcaacaactacgggccctaccacttccccgagaagctc
atcccgctgatgatcgtcaacgccctggccggcaagcccctgccggtctatggcgacggc
cagcagatccgcgactggctgtacgtcaaggaccactgcagcggcatccgcgccgtgctg
gccggcggccgcctgggcgagacctacaacatcggcggctggaacgagaaggccaacctg
gacatcgtccagacggtgtgcgcgctgctcgacgagctgcggccggacccggcgggcccc
tacagccggctgatcacctacgtcaccgatcggccgggccacgaccggcgctacgccatc
gacgcgcgcaagatcgagcgcgagctgggctggcgcccggccgagaccttcgagaccggc
atccgcaagacggtgcagtggtacctggaccacccggactgggtggccgatgtgcagagc
ggggcctaccaggcctgggtcggcacccactacggagcgcgttga
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