Ideonella dechloratans: LRM40_02415
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Entry
LRM40_02415 CDS
T07737
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
idc
Ideonella dechloratans
Pathway
idc00550
Peptidoglycan biosynthesis
idc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
idc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LRM40_02415
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
idc01002
]
LRM40_02415
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
idc01011
]
LRM40_02415
Enzymes [BR:
idc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LRM40_02415
Peptidases and inhibitors [BR:
idc01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
LRM40_02415
Peptidoglycan biosynthesis and degradation proteins [BR:
idc01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
LRM40_02415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Peptidase_S13
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
UFU10583
LinkDB
All DBs
Position
515842..517005
Genome browser
AA seq
387 aa
AA seq
DB search
MTSLRSPLFGAVLALGTVLPAAAQLPQPPEIAAHGYLLLDMTTNQVLAERDADSRFEPAS
LTKLMTAYEVFQALRDKKVSLDQRLPVSMRAWAERKGGGSLMFIDTTMQPTVDELLKGMI
VQSGNDASVALAEGTAGSLDGFVGLMNRQAQAWGLKNTAFKNVTGLTEAGHYSSARDISV
IASHIIRDFPERYPYYSIKEYTYNKIRQDNRNLLLRRDPSVDGMKTGYTDGAGYCLVASA
QRDFPNGKRRLLSVVLGAASKEGRADESQKLLNWGFTQFDAIRLFDASKPVATVKVWKGA
KPEVALVGPQGAVYVSVPKGEGDKLKTSIERTDPLVAPLTKGQRVGTLKVTDAAGAAVAT
VPLVVAEDVPLAGIFGRAWDAIRLWIK
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgacctctcttcgctcccccctgttcggtgccgtgctggcgctgggcaccgtgctgccg
gccgccgcgcagctgccgcaacccccggaaatcgccgcccacggctacctgctgctggac
atgacgaccaaccaggtgctggccgagcgcgacgccgactcccgcttcgagcctgcctcg
ctgaccaagctgatgaccgcctacgaggtcttccaggccctgcgcgacaagaaggtctcg
ctggaccagcgcttgcccgtgtccatgcgggcctgggccgagcgcaagggcggcggctcg
ctgatgttcatcgacaccaccatgcagcccacggtggacgagctgctcaagggcatgatc
gtgcagtcgggcaacgacgcctccgtggccctggccgagggcacggccggcagcctggac
ggcttcgtcggcctgatgaaccgccaggcccaggcctggggcctgaagaacaccgcgttc
aagaacgtcaccggcctgaccgaagcgggccactattccagcgcccgcgacatctcggtg
atcgcctcgcacatcatccgcgacttccccgagcgctacccctactactccatcaaggag
tacacctacaacaagatccgccaggacaaccgcaacctgctgctgcgccgggatccttcg
gtggacggcatgaagaccggctacaccgatggcgccggctactgcctggtggcctcggcc
cagcgcgacttccccaacggcaagcgccgtctgctgtcggtggtgctgggcgccgcttcc
aaggagggccgggccgacgagagccagaagctgctgaactggggcttcacccagttcgat
gcgatccgtctcttcgacgccagcaagccggtggccacggtcaaggtgtggaagggcgcc
aagcccgaggtcgcactggtcggtccgcagggcgcggtctatgtctcggtgcccaagggc
gaaggcgacaagctcaagaccagcatcgagcgcaccgacccgctggtggcgccgctgacc
aagggccagcgcgtgggcacgctcaaggtgaccgatgcggccggtgccgccgtggccacc
gtgcccctggtggtggccgaggacgtgccgctggccggcatcttcggccgtgcctgggat
gccatccgcctctggatcaagtaa
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