Ideonella dechloratans: LRM40_04375
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Entry
LRM40_04375 CDS
T07737
Name
(GenBank) hydrogenase small subunit
KO
K06282
hydrogenase small subunit [EC:
1.12.99.6
]
Organism
idc
Ideonella dechloratans
Pathway
idc00633
Nitrotoluene degradation
idc01120
Microbial metabolism in diverse environments
idc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
idc00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00633 Nitrotoluene degradation
LRM40_04375
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LRM40_04375
Enzymes [BR:
idc01000
]
1. Oxidoreductases
1.12 Acting on hydrogen as donor
1.12.99 With unknown physiological acceptors
1.12.99.6 hydrogenase (acceptor)
LRM40_04375
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Motif
Pfam:
NiFe_hyd_SSU_C
Oxidored_q6
Zn_ribbon_IFT122
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
UFU10923
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Position
complement(928259..929335)
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AA seq
358 aa
AA seq
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METFYEVMRRQGISRRSFLKYCSLTATSLGLGPAFVPQIAHAMETKPRTPVLWLHGLECT
CCSESFIRSAHPLAKDVVLSMISLDYDDTLMAAAGHQAEAILDEIMTKYKGNYILAVEGN
PPLNEDGMFCIQSGKPFIEKLQRVAKDSKAIIAWGSCASWGCVQAAKPNPTQATPIHKVI
TDKPIIKVPGCPPIAEVMTGVITYMLTFDKIPELDRQGRPKMFYSQRIHDKCYRRPHFDA
GQFVEAFDDESARKGYCLYKVGCKGPTTYNACSTVMWNEGTSFPIKAGHGCIGCSEDGFW
DKGSFYDRLTTIHQFGIEGNADKIGGTAAGVVGAAVAAHAAVSAVKRLSTKHDQTTDA
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgttttacgaggtcatgcggcggcagggcatttcacgccgcagcttcctcaag
tactgctcactgaccgccacctccctggggctgggcccggccttcgtgccgcagatcgcc
cacgccatggagaccaagccgcgcaccccggtgctgtggctgcatggcctggaatgcacc
tgctgctccgagagcttcatccgctcggcccacccgctggccaaggacgtggtgctctcg
atgatctcgctggactacgacgacacgctgatggctgccgccggccaccaggccgaggcc
atcctcgacgagatcatgaccaagtacaagggcaactacatcctggccgtcgagggcaac
ccgcccctgaacgaggacgggatgttctgcatccagtcgggcaagcccttcatcgagaag
ctgcagcgcgtggccaaggacagcaaggccatcatcgcctggggctcctgcgccagctgg
ggctgcgtgcaggccgccaagcccaaccccacgcaggccacgcccatccacaaggtcatc
accgacaagcccatcatcaaggtgcccggctgcccgccgatcgccgaggtgatgaccggc
gtgatcacctacatgctcaccttcgacaagatccccgagctggaccgccagggccgcccg
aagatgttctacagccagcgcatccacgacaagtgctaccgccggccgcacttcgacgcc
ggccagttcgtcgaggccttcgacgatgagagcgcgcgcaagggctactgcctctacaag
gtcggctgcaagggcccgaccacctacaacgcctgctccacggtgatgtggaacgagggc
acgagcttcccgatcaaggccggccacggctgcatcggctgctcggaagacggcttctgg
gacaagggctcgttctacgaccgcctgaccaccatccaccagttcggcatcgaaggcaac
gccgacaagatcggtggcaccgccgccggcgtggtgggtgccgcggtggcggcgcatgcc
gccgtctcggccgtcaagcgcctgagcacgaagcacgaccagaccaccgacgcctga
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