KEGG   Ideonella dechloratans: LRM40_05040
Entry
LRM40_05040       CDS       T07737                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
idc  Ideonella dechloratans
Pathway
idc03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:idc00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    LRM40_05040 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:idc02044]
    LRM40_05040 (tssM)
Secretion system [BR:idc02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   LRM40_05040 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical FecCD DUF4381 DUF1616 DUF6077 Phage_holin_3_6
Other DBs
NCBI-ProteinID: UFU11044
LinkDB
Position
1069349..1073188
AA seq 1279 aa
MNRFLQLLLDPRVLGVLGLAALAAFLFLGADALQWGLTLAAIVFGLVLLTVVLVWTVRRW
RARRAARRMEQELESTLGEADRAGRGGKEGTETAVIRERLVEALKTIKTSKLGQTTGQAA
LYELPWYMVIGNPAAGKSTAIVQSGLHFPFARGTDNILRGIGGTRNCDWFFTSEGILIDT
AGRYAVHEEDRGEWLSFLGMLKRNRPKAPINGILIAASLAELIEAKPDAVIRLAKSLRQR
VQELTESLEVFAPVYVVFTKADLIPGFVDFFEDQDAKERERVWGATLAYRPDAPVDAVEQ
FDAHFDELQDGLRELAMARMALNRGRPLSPAVLAFPLEFAAMQNVLRSFVATLFEDNPYQ
YRPVFRGFYFTSAVQQGVVGDRARNGVAQRFGLGAPSGPAPAPVQTENGFFLKDLFSKVL
FADRQLVRQHASKAKVRLRIATFAGGVGVLALALAGWSWSYVGNRQLVQNVQADLDKAVK
LQQGQTDLASRLQAMELLQNRVEQLDAWRDSHPWSVGLGLYQGQVLERKLRSEYFHGVRE
LMLKPVSQAIEGYLGEVNRHAAELKPIKAVEAGVQPVALSASAAQAAASAAGSGSAAVAA
PSRYVQASTTDVEDAYKALKTYLMLAERQRMDAGHLTDQITRFWRSWLEDNRGNLPREQM
MRSAERMVSFSMANLNDPAYPVLDNNFSLVDQTRENLRRVVQGAPALERVYAEVKARAST
RFPPMTVARIVGDTGKDTVLGSQVVSGTFTREAWQGYVNEAFQQAAEHELQSVDWVLKTD
TRDDLSLQGSPEDIRRKLTERYKNEYVVEWQRFIQGITVADFNSFDAAVNHMNRLGDKAD
SPIRKLLTVLYDQTSWDNPSILNERLAKTRQGFVEWFKQSVLRMAPSRVEFKVDVAGGEQ
GIPMGPVGREFAVLARWMDARDGGAAPIDGYLQSLSKLRTRFNQMKSQGDPGPASRELMA
ATLSGSGSELADALKYVDEQMFTGATDSAKATLKPMLVRPLMQSFAVLVPPAETELNRLW
TAQVLQPFQQNLAGKYPFDTSSRIEASATEVARVFGPSGAVAKFASESLGPLVNRRGDAI
TARQWAEQGLRLRPEFVDGFPAWVAALDGAEGGAAAATAGATAGSAQSAFQLMPMGAPGF
LEYTVEIDGQTLRYRNGTAQWASFVWPNPGGTPGVRISGVTLDNRTVEVFSAPGAYGFER
LIAAAQVNKLPDGVRELRWGEGRNAITLHYRAITMPGAAQATGSSGAARGKGLRGLSLPA
LVAGTAPAEATVAKAGVAP
NT seq 3840 nt   +upstreamnt  +downstreamnt
atgaatcgatttcttcaactgctgctggacccgcgggtcctgggggtgctcgggctggcg
gctctggcggccttcctgttcctcggggcggatgcgctccagtgggggctgacgctggcg
gccatcgtgttcgggctggtgctgctgacggtggtgctcgtctggaccgtgcgccgttgg
cgcgcacgacgtgcggcccggcgcatggagcaggagctcgaaagcacgctgggcgaagcg
gaccgcgcggggcgcggtggcaaggagggcacggagaccgcggtcatccgcgaacgtctg
gtggaggccctcaagaccatcaagacctccaagctggggcagaccaccgggcaggccgca
ctctatgagctgccctggtacatggtcatcggcaacccggcggccggcaagagcacggcc
atcgtccagtcgggcctgcactttcccttcgcccgcggcaccgacaacatcctgcgcggc
atcggtggcacacgcaactgcgactggttcttcaccagcgaaggcatcctgatcgacacg
gccggccgctatgcggtgcacgaggaggaccgtggcgagtggctcagctttctgggcatg
ctcaagcgcaaccggcccaaggccccgatcaacggcatcctgatcgcggccagcctggcc
gagctgatcgaggccaagcccgatgcggtgatccgcctggccaagagcctgcgccagcgc
gtgcaggagctcacggagagcctggaggtgttcgcgccggtctatgtggtgttcaccaag
gccgacctgattcccggcttcgtggacttcttcgaggaccaggatgcgaaggagcgcgag
cgggtctggggggccacgctggcctaccggccggacgcaccggtggatgcggtcgagcag
ttcgatgcccacttcgacgagctgcaggatgggttgcgcgaactggccatggcccgcatg
gccctgaaccggggccggccgctgtcgccggccgtgctcgccttcccgctcgagttcgcg
gccatgcagaacgtgctgcgcagcttcgtggccaccctgttcgaggacaacccctaccag
taccggccggtgttccgtggcttctacttcaccagcgcggtgcagcagggcgtggtgggc
gaccgcgcccgcaatggcgtggcccagcgcttcggcctcggggcgccgtccggcccggcg
cctgcgccggtgcagacggagaacggcttcttcctcaaggacctcttctccaaggtgctg
ttcgccgaccggcagctggtgcggcagcatgccagcaaggccaaggtccgcctgcgcatc
gccactttcgccgggggcgtgggggtgctggcgctggctctggcgggctggagctggtcc
tatgtgggcaaccgccagctggtgcagaacgtccaggccgacctggacaaggcggtcaag
ctgcagcaggggcagaccgatctggcgtcccgtctgcaggccatggagctgctgcagaac
cgggtcgagcagctcgatgcctggcgcgatagccatccctggtcggtgggcctgggcctc
taccagggccaggtcctggagcgcaagctgcgcagcgaatacttccacggggtgcgcgag
ctgatgctcaagccggtgtcccaggccattgaaggctatctcggcgaggtgaaccgccac
gcggccgagctcaagccgatcaaggcggtggaggctggcgtccagccggtggcgctgtcg
gcgtcggcggcccaggccgcggccagcgccgcgggcagcggttccgccgcggtggccgcg
ccctcacgctatgtgcaggcttccaccacggatgtggaagatgcctacaaagccttgaag
acctacctcatgctggccgagcgccagcgcatggacgccggccacctgaccgaccagatc
acccgcttctggcgcagctggctggaggacaaccgcggcaacctgccgcgcgaacagatg
atgcgcagcgcggagcgcatggtcagtttctcgatggccaacctgaacgacccggcctac
ccggtgctggacaacaacttcagcctggtggaccagacccgcgagaacctgcgccgcgtg
gtgcagggggcgcccgcgctggagcgcgtctacgccgaggtcaaggcacgtgcctccacc
cgcttcccgccgatgacggtggcccgcatcgtgggcgacaccggcaaggacaccgtgctg
ggcagccaggtggtgtcgggcaccttcacccgcgaggcctggcagggctatgtcaacgag
gccttccagcaggccgccgagcatgagctgcagagcgtggactgggtgctcaagaccgac
acccgtgatgacctgtcgctgcagggcagcccggaggacatccgtcgcaagctgaccgag
cgctacaagaacgagtacgtggtcgagtggcagcgcttcatccagggcatcacggtggcc
gacttcaacagcttcgacgcggcggtcaaccacatgaaccgcctgggcgacaaggccgac
tcgcccatccgcaagctgctcaccgtgctctacgaccagacctcctgggacaacccgtcc
atcctcaacgagcgcctggccaagacgcggcagggctttgtcgagtggttcaagcagagc
gtgctgcgcatggcgccctcgcgcgtcgagttcaaggtcgatgtggccggtggcgagcag
ggcatcccgatggggccggtgggccgcgagttcgcggtgctggcgcgctggatggacgcc
cgtgacggtggggcggcgccgatcgatggctatctgcaatcgctcagcaagctacgcacg
cgcttcaatcagatgaagagccagggcgatccgggcccggcctcgcgcgagctgatggcc
gccaccctgtcgggcagcggctccgagctggccgatgcgctgaagtatgtcgacgaacag
atgttcaccggcgccaccgactcggccaaggccacgctcaagcccatgctggtgcggccc
ctgatgcagtcctttgccgtgctggtgcccccggccgaaaccgagctgaaccgcctgtgg
accgcccaggtgctgcagcccttccagcagaacctggcgggcaagtaccccttcgacacc
agttcgcgcatcgaggccagtgccaccgaggtggcgcgggtgttcgggccctccggcgcg
gtggccaagttcgccagcgagtcgctggggcccctggtgaaccgccggggtgacgccatc
accgcccgccagtgggccgagcagggcctgcgtctgcgtcccgagttcgtggacggcttc
ccggcctgggtggccgcgctggacggggccgaaggcggcgccgcggcggccacggccggt
gccacggccgggtcggcgcagagcgccttccagctcatgcccatgggggcgcccggcttc
ctggagtacacggtggagatcgacggccagaccctgcgctaccgcaacggcacggcgcag
tgggccagcttcgtctggcccaacccgggcggtacgcccggggttcggatctccggtgtc
acgctggacaaccggaccgtcgaggtcttcagcgcgccgggcgcctacggcttcgagcgc
ctgatcgcggcggcccaggtgaacaagctgcccgatggcgtgcgcgaactgcgctggggc
gagggccgcaacgccatcaccctccattaccgggccatcaccatgcctggcgcggcacag
gccacgggcagcagcggcgccgcccgcggcaagggcctgcgcgggctgagcctgcctgcc
ctggtggccggtacggcaccggccgaggcgacggtggccaaggcgggggtggctccgtga

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