Ideonella dechloratans: LRM40_05865
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Entry
LRM40_05865 CDS
T07737
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
idc
Ideonella dechloratans
Pathway
idc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
idc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LRM40_05865 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
idc01007
]
LRM40_05865 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
idc03016
]
LRM40_05865 (aspS)
03029 Mitochondrial biogenesis [BR:
idc03029
]
LRM40_05865 (aspS)
Enzymes [BR:
idc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
LRM40_05865 (aspS)
Amino acid related enzymes [BR:
idc01007
]
Aminoacyl-tRNA synthetase
Class II (A)
LRM40_05865 (aspS)
Transfer RNA biogenesis [BR:
idc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
LRM40_05865 (aspS)
Prokaryotic type
Other AARSs
LRM40_05865 (aspS)
Mitochondrial biogenesis [BR:
idc03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
LRM40_05865 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
UFU11200
LinkDB
All DBs
Position
1245084..1246874
Genome browser
AA seq
596 aa
AA seq
DB search
MRTTYCGLVSEALMGETVTLMGWAHRRRDHGGVIFIDLRDREGLVQIVCDPDRPDMFKTA
EGVRNEFCLKIVGKVRARPAGTENANLVSGKIEVLCHELEVLNPSVTPPFQLDDDNLSET
VRLTHRVLDLRRPQMQQNLKLRYRVAMEVRKFLDANGFIDIETPMLTKSTPEGARDYLVP
SRVHDGHFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDIETSFL
GEEEIRAMFEGMIRSVFKNAIGVELPVYPVMTYADAMFKYGSDKPDLRVKLEFTELTDVM
KDVDFKVFSTPATTPGGRVVALRVPGGADMSRGEIDGYTEFVKIYGAKGLAWIKVNDVAK
GRDGLQSPVVKNLHDAAIAETLARTGACNGDLIFFGADKAKVVNDAIGALRIKIGHSEFG
KSKGLFDDRWAPLWVIDFPMFEYDEEEDRWNACHHPFTSPKDGHEELMATNPGACVAKAY
DMVLNGWELGGGSIRIHRADVQSKVFEALKITPEEQRIKFGFLLDALQYGAPPHGGLAFG
LDRLITLMTKAESIRDVIAFPKTQRAQCLLTGAPSMVDEKQLRELHIRLRNVQAAG
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccacgtactgcggcctggtcagcgaagcgctgatgggcgaaaccgtcaccctg
atgggctgggcccaccgtcgccgcgaccacggtggcgtcatcttcatcgacctgcgcgac
cgcgaaggcctggtgcagatcgtctgcgacccggaccgcccggacatgttcaagaccgcc
gaaggcgtgcgcaacgagttttgcctgaagatcgtcggcaaggtgcgcgcccgcccggcc
ggcaccgagaacgccaacctcgtctccggcaagatcgaggtgctgtgccatgagctggag
gtgctgaacccctccgtcacgcccccgttccagcttgacgacgacaacctgtcggaaacc
gtgcgcctgacccaccgggtgctggacctgcgccgcccgcagatgcagcagaacctgaag
ctgcgctaccgcgtggccatggaggtgcgcaagttcctggacgccaacggcttcattgac
atcgagacgccgatgctgaccaagtccacgcccgaaggtgcgcgcgactacctggtgccc
agccgcgtgcacgacggtcacttcttcgcgctgccgcagtcgccccagctgttcaagcag
ctgctgatggtcgcgggcttcgaccgctactaccagatcaccaagtgcttccgtgacgag
gacctgcgcgccgaccgccagcccgagttcacccagatcgacatcgagacctccttcctc
ggcgaggaggagatccgcgccatgttcgagggcatgatccgctcggtgttcaagaacgcc
atcggcgtggaactgccggtctacccggtcatgacctatgccgacgcgatgttcaagtac
ggctcggacaagcccgacctgcgcgtcaagctcgagttcaccgagctgaccgacgtcatg
aaggacgtggacttcaaggtcttctcgaccccggccaccaccccgggcggccgtgtggtg
gccctgcgcgtgccgggcggcgccgacatgtcgcgtggcgagatcgacggctacaccgag
ttcgtcaagatctacggcgccaagggcctggcctggatcaaggtcaacgacgtcgccaag
ggccgtgacggcctgcagtcgccggtcgtgaagaacctgcacgacgccgccatcgccgag
accctggcccgtaccggggcctgcaacggcgacctgatcttcttcggcgccgacaaggcc
aaggtggtcaatgacgccatcggtgcgttgcgcatcaagatcggccacagcgagttcggc
aagtccaagggcctgttcgacgaccgctgggccccgctgtgggtgatcgacttcccgatg
ttcgagtacgacgaggaagaagaccgctggaacgcctgccaccaccccttcaccagcccg
aaggacggccatgaggaactgatggccaccaaccccggcgcctgcgtggccaaggcctac
gacatggtgctcaacggctgggaactgggtggcggctcgatccgtatccaccgcgccgac
gtgcagtccaaggtcttcgaggccctgaagatcacgccggaggagcagcgcatcaagttc
ggcttcctgctggacgcgctgcagtacggcgcgccgccgcacggtggcctggccttcggc
ctggaccgcctgatcacgctgatgaccaaggccgagtcgatccgcgacgtgatcgccttc
cccaagacccagcgtgcccagtgtctgctgaccggtgccccgtcgatggtcgacgagaag
cagctgcgcgaactgcacatccgcctgcgcaacgtgcaggccgcgggctga
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